| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0236 |
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| Symbol | |
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| ID | 5537698 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 292656 |
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| End bp | 293939 |
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| Gene Length | 1284 bp |
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| Protein Length | 427 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892400 |
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| Product | glycoside hydrolase family protein |
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| Protein accession | YP_001430387 |
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| Protein GI | 156740258 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3858] Predicted glycosyl hydrolase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.946452 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 22 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACACG TTTTTTCGTC ACCGCTGGCT GCATCGCTCT ATGCTGTGGC GCTGATCGTC
TGGGCATTGC TGGTCGTCGA TACGGTGAGT CTTGCCCGGC GCGCCACTGA GCCGCCGATC
TTTCCGACGC CAACGACCGT CGCAGTGGTG ACGCCCGTCG CGGCAACGCG GGTAGCGGCG
CCCACATCGA TGCCGCCGGT GCAGGCAACT GTCGTTCCCC TCATGACGCC GGAACTTGAC
GCAGAAGATG GCTGGTTTCA TCCGAAGACC GGACGTTATA TTGCTGCCTG GCTCCCCAAC
TCGTTCGGCT CCGAAAATCG TGAGTCGTTT GAGGCGAATG CCGATATTCT CGATGAGATC
AGCCCGTTCT GGTACTCGCC GTCGCCTGGC GGCGAGCTGC GGTTTGGGCG CGAGGCGCGC
GACCGCACGC TGCTCGAACT GGCGCATGGC AAAAACGTCC TCGTCATTCC AACCGTCCAC
AACGTCGTTA CCGGCGAAGA CCCGGTGCCG GGCATTCTGC GCAATCCGCG CCTGCGGTCG
TACCACGTGC AGCAGATCGT CGATGAGGTG TTGACCTATG GCTACGACGG GATCGATATC
GACTATGAGT TTCTCAGCAG CAGTCTGCGC GATGACTATA GCGCCTTTAT TCTGGAACTG
GCGGATGCGC TGCATGCGCA TGGCAAACTG CTGACGGTCG CTGTTCATGC GAAAGATTGT
GATTATTGCG GACTGGGAGG TTTTCAGGAT TGGGCTGTGA TCGGTCAGGT GGTTGACCGG
TTGCGCATTA TGACCTACGA TTACCACTGG CGCGGCGGCG GTCCTGGTCC GGTGGCGCCG
GTCTATTGGG TCGAACGGGT GGCGCGCTAC GCGGTGACGG TCGTTGATCC GGCGAAGGTG
GTGATCGGCG TGCCGTTCTA CGGCTACAAC TGGTCCCGTG ACGGCAGCGG CAATGCGCGC
GGGCAGACGT GGGCGATGAT TAATGAGATC ATTCAAACCT ACCGCCTGTC GGTCAATCTC
ATGGAGAGCA ATCAGAATGG TCTGGTGCAG GAAAACTGGA TCACCTACAG TTCGCGCACC
GAAGGACGGC GTGAGGTCTG GTTCGCTACG AGCAGCGGTC TCGACGCAAA ACTGCGCCTG
GTGCAGGAAC TCGATCTGGC GGGGATTGCG ATCTGGCGGC TCGGCGGCGA AGACCCGCGC
AACTGGGAGA TCATTCGCGC GCGCCTGCTC CAGGACCCGT ATGAGTCGCA GCGGGTGTTG
AGTCGCCTTT TGCCGGAGCA TTGA
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| Protein sequence | MRHVFSSPLA ASLYAVALIV WALLVVDTVS LARRATEPPI FPTPTTVAVV TPVAATRVAA
PTSMPPVQAT VVPLMTPELD AEDGWFHPKT GRYIAAWLPN SFGSENRESF EANADILDEI
SPFWYSPSPG GELRFGREAR DRTLLELAHG KNVLVIPTVH NVVTGEDPVP GILRNPRLRS
YHVQQIVDEV LTYGYDGIDI DYEFLSSSLR DDYSAFILEL ADALHAHGKL LTVAVHAKDC
DYCGLGGFQD WAVIGQVVDR LRIMTYDYHW RGGGPGPVAP VYWVERVARY AVTVVDPAKV
VIGVPFYGYN WSRDGSGNAR GQTWAMINEI IQTYRLSVNL MESNQNGLVQ ENWITYSSRT
EGRREVWFAT SSGLDAKLRL VQELDLAGIA IWRLGGEDPR NWEIIRARLL QDPYESQRVL
SRLLPEH
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