| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0232 |
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| Symbol | |
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| ID | 5537694 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 288729 |
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| End bp | 289787 |
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| Gene Length | 1059 bp |
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| Protein Length | 352 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892396 |
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| Product | peptidase M42 family protein |
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| Protein accession | YP_001430383 |
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| Protein GI | 156740254 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1363] Cellulase M and related proteins |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 23 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACAACC ATTCGCTTGC CTTTTTGAAG CAACTGCTCG CCACTCCTGG TCCTTCCGGT
GAAGAAGTCG CCGCCGGGCG CGTCTGGCGA CGCGAAGCCG AAACCTTTGC TGACCGGGTC
TATGCCGATG TGCGCGGGAG TTCGTATGCT GTGCTCGAAG GGGGCGCGCC GCGCGTGCTG
CTCGCCGGAC ATATCGACGA GATTGGGGTG ATGGTCAGTT ATATCGACGA CGATGGCTTC
CTCTGGTTTT CGCCGATTGG CGGGTGGGAC CCGCAGGTGC TCGTCGGGCA GCGGGTGCGG
TTGCTGGGGC GCGCCGGCGA TGTAATCGGC GTGATCGGGA AGAAACCCAT CCACCAGATG
AAATCCGAGG AACGGGAAAA AGCCAGCAAG ATTGAAGACC TCTGGATCGA TATTGGTGCG
GCGAACCGGG CAGAAGCCGA GGCGCTCGTG CGTGTCGGCG CTGCTGGAGT GATCGATGCG
CCGATCTACG ATCTGCCGGG TGGAAAGGTT GTCTCACGCA GCATCGACGA CCGGATTGGC
GCGTTCACCG TGCTGGAAGC GCTGCGCCTG CTGGCGCGCG ACCGCCCGCG CGCGACGGTG
GCAGCAGTGG CGACATCGCA AGAGGAGATC ACCTTTGCGG GAGCGCGCAC CGCAGCGTTC
AGTTTCGAAC CGCAGGTGGC GATTGCGGTG GATGTGACGT TTGCCACCGA TCACCCCAAT
GCGGATCGGA AGCAGTATGG CAACGTGCGG TTGGGTGGCG GACCGGTGCT GTCGCGCGGT
TCTGCCAACA GCCCGGTGGT GTACGATATG CTCGTGGCGG TCGCCGAGCG CGAGGGCATT
CCGTACAGCG TGCAGATCAA CCCGCGCTAC ACCGGCACCG ACGCCGATGC CATTCACATC
GCGCGTGGCG GTGTCGCTAC CGGCGTTGTG TCGATCCCGA ACCGCTACAT GCACTCACCC
AACGAAATGA TCGCGCTGAG CGACGTTGAA CATGCCGCGC GCCTGATCGC TGCGTTTGTG
CGCAGTCTGG GACCGGAGAC TGATTTCATT CCACGCTAA
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| Protein sequence | MNNHSLAFLK QLLATPGPSG EEVAAGRVWR REAETFADRV YADVRGSSYA VLEGGAPRVL
LAGHIDEIGV MVSYIDDDGF LWFSPIGGWD PQVLVGQRVR LLGRAGDVIG VIGKKPIHQM
KSEEREKASK IEDLWIDIGA ANRAEAEALV RVGAAGVIDA PIYDLPGGKV VSRSIDDRIG
AFTVLEALRL LARDRPRATV AAVATSQEEI TFAGARTAAF SFEPQVAIAV DVTFATDHPN
ADRKQYGNVR LGGGPVLSRG SANSPVVYDM LVAVAEREGI PYSVQINPRY TGTDADAIHI
ARGGVATGVV SIPNRYMHSP NEMIALSDVE HAARLIAAFV RSLGPETDFI PR
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