Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0226 |
Symbol | |
ID | 5537688 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 283406 |
End bp | 284323 |
Gene Length | 918 bp |
Protein Length | 305 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 640892390 |
Product | ApbE family lipoprotein |
Protein accession | YP_001430377 |
Protein GI | 156740248 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG1477] Membrane-associated lipoprotein involved in thiamine biosynthesis |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.965789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 21 |
Fosmid unclonability p-value | 0.907816 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACGCTT TTCTCGACGG CAACGACGAT GCGGCGACGA GGACGCTGCG CGCGGTCCCG CGCTGGTTCG CTGAATGGGA GCGCATCCTG AGCCGCTTCC GCAGCGACAG TGAACTCTCG GCGCTCAACA CGCGGGCTGG CGAGGGATGG GTGCGCGCCA GCCGCACGCT GTGGGAAGTG CTGAACGACG CACTTGTGGC AGCGCGTCTC AGCGATGGTC TGGTGACGCC GACCGTGTTG ACGGCGCTAG AGGCGACTGG CTACGACCGG GATTTTGCGC AGATCGCCGC TGGCGCTCCG GCACAATCAT CGGCGAGCCT CCCGGCGTCC GGCGACTGGC GCGCCATCCG GCTCGACCCA CAGCGACGCA CAGTGGCATT GCCGCCGGGA ATGCGCCTCG ATCTGAACGG CGTCGCCAAA GGGTGGGCGG CAACCCGAGC AGCGCAGCGG TTGGCGGCGC ACGGACCGGC GCTCGTCGAT GCTGGCGGCG ATATTGCGGT GCGAGGCGCG CGCGCCGGTG GAGAGCCATG GGCTATCGGC ATCGCCAATC CGTTTCAACC GGATGTGCCG CTTGATGTCG TGCTGCTAAC GGACGGCGGC GTTGCGACAT CAGGACGTGA TGTGCGGCGC TGGCGGCAGG GAAGCGTCGA ACGGCATCAC ATTATCGATC CGCGCACCGG CGCGCCGGCT GAGACCGACG TGCTGGCAGT GACGGTCATC GCGCCGTCTC TGTTCGAAGC AGAAGTTGCT GCGAAAGTGG TCGTCATTTT GGGAAGCGTA GCAGGCATGG AGTGGCTATC CGCCCGCCCG TGGCTTGCCA GTCTGATTGT AACCGATGCG CAAGAAGTCT TGCACACCGC GACATTTGAA CAGTTCCGCT GGCATGAGCC AGAAGATATG GAGGTGGTCT ATGAGTGA
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Protein sequence | MHAFLDGNDD AATRTLRAVP RWFAEWERIL SRFRSDSELS ALNTRAGEGW VRASRTLWEV LNDALVAARL SDGLVTPTVL TALEATGYDR DFAQIAAGAP AQSSASLPAS GDWRAIRLDP QRRTVALPPG MRLDLNGVAK GWAATRAAQR LAAHGPALVD AGGDIAVRGA RAGGEPWAIG IANPFQPDVP LDVVLLTDGG VATSGRDVRR WRQGSVERHH IIDPRTGAPA ETDVLAVTVI APSLFEAEVA AKVVVILGSV AGMEWLSARP WLASLIVTDA QEVLHTATFE QFRWHEPEDM EVVYE
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