Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0222 |
Symbol | |
ID | 5537684 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 279033 |
End bp | 279581 |
Gene Length | 549 bp |
Protein Length | 182 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640892386 |
Product | hypothetical protein |
Protein accession | YP_001430373 |
Protein GI | 156740244 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 18 |
Fosmid unclonability p-value | 0.36271 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACACAGG AACAAACGTC CCAGCAGCAA AAAGTCGATA CCGGTCCGCT GCCGCCGTTG CCGCCGTTGC CGGAACCGCC GCCATCGCCA CGCCAGGCAT CGCGCCGGAC GATGCTCGTC GCCGGCATTG CTGTCCTGGC AGTTGCAGGA ATTGCACTCT GGTGGTTCAC CCGCCCTTCC GATCCAATGA GCGATCCGCG ACCGGTGCAG ACGGTGCAGA ACTTCGTCGC TGCCACTGAA GCGCGCGATG TGTCACGAAT GCTCTCTTAT GTTGAACCGA CCGATCTCAA ACGGCAGATC AGTCCGGAAC TGCGCTCATA CATGGAATAT ATCACCGACC TGCAATTCAA GAATGAGACG TACACGCTGG TCGATAACAA CGGCTCGATT GCGCGCGTCC GCCTGACCGG CACGGTGCGC TACACCGTCG ATTACGGCTC GGTCTACTCG GGTGAACGTT CATTCGATAC GATCTTCGAA CTGGTGCTGC TGGAAGGTAC ATGGTACCTG CGCAGTCTGC AATTGCCGGA ACTGGAACAG CAACAATAG
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Protein sequence | MTQEQTSQQQ KVDTGPLPPL PPLPEPPPSP RQASRRTMLV AGIAVLAVAG IALWWFTRPS DPMSDPRPVQ TVQNFVAATE ARDVSRMLSY VEPTDLKRQI SPELRSYMEY ITDLQFKNET YTLVDNNGSI ARVRLTGTVR YTVDYGSVYS GERSFDTIFE LVLLEGTWYL RSLQLPELEQ QQ
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