Gene Rcas_0222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0222 
Symbol 
ID5537684 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp279033 
End bp279581 
Gene Length549 bp 
Protein Length182 aa 
Translation table11 
GC content58% 
IMG OID640892386 
Producthypothetical protein 
Protein accessionYP_001430373 
Protein GI156740244 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.36271 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACACAGG AACAAACGTC CCAGCAGCAA AAAGTCGATA CCGGTCCGCT GCCGCCGTTG 
CCGCCGTTGC CGGAACCGCC GCCATCGCCA CGCCAGGCAT CGCGCCGGAC GATGCTCGTC
GCCGGCATTG CTGTCCTGGC AGTTGCAGGA ATTGCACTCT GGTGGTTCAC CCGCCCTTCC
GATCCAATGA GCGATCCGCG ACCGGTGCAG ACGGTGCAGA ACTTCGTCGC TGCCACTGAA
GCGCGCGATG TGTCACGAAT GCTCTCTTAT GTTGAACCGA CCGATCTCAA ACGGCAGATC
AGTCCGGAAC TGCGCTCATA CATGGAATAT ATCACCGACC TGCAATTCAA GAATGAGACG
TACACGCTGG TCGATAACAA CGGCTCGATT GCGCGCGTCC GCCTGACCGG CACGGTGCGC
TACACCGTCG ATTACGGCTC GGTCTACTCG GGTGAACGTT CATTCGATAC GATCTTCGAA
CTGGTGCTGC TGGAAGGTAC ATGGTACCTG CGCAGTCTGC AATTGCCGGA ACTGGAACAG
CAACAATAG
 
Protein sequence
MTQEQTSQQQ KVDTGPLPPL PPLPEPPPSP RQASRRTMLV AGIAVLAVAG IALWWFTRPS 
DPMSDPRPVQ TVQNFVAATE ARDVSRMLSY VEPTDLKRQI SPELRSYMEY ITDLQFKNET
YTLVDNNGSI ARVRLTGTVR YTVDYGSVYS GERSFDTIFE LVLLEGTWYL RSLQLPELEQ
QQ