Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0219 |
Symbol | |
ID | 5537681 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 277462 |
End bp | 277938 |
Gene Length | 477 bp |
Protein Length | 158 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 640892383 |
Product | NUDIX hydrolase |
Protein accession | YP_001430370 |
Protein GI | 156740241 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG1051] ADP-ribose pyrophosphatase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.203556 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 19 |
Fosmid unclonability p-value | 0.450694 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCTATGA CGATTAATTA CACGGCATGG CTGCGCAGTT ATGTTGGTCA CCAGCGCCTG CTGCAACTTG CTGCGAGCGC ATTCATTCGC AATGATCGGG GACATGTGCT GCTCGGTCAG CGCTCCGATG TGATGCTGTG GGCGCCACCG TCCGGCGTGG TGCAACTTGG CGAAACGCCG GCGCGCACCC TGGTGCGCGA AGTGCTCGAA GAGACCGGAC TGCACGTCGT GGTCGAGCGC CTGATCGGGC TGTACACCGG GCGCGAATTC GAGTGGACCT ACCCGAACGG CGATCAGGCG CAGATCGTCA GCGCCTTCTT CGCCTGCCGC GTCACCGGAG GCATGCTGCA ACCGGACCAT ACGGAGTTTG TGTCGCTCGC CTATTACCCA CCCGACCGCC TGCCGCCGCT GATGCCGCGC TATGTGCGCA TGGTGCGCGA TGCGTTCGCC GGGCGCGCGG AAGCGGCGTT CGATTAG
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Protein sequence | MPMTINYTAW LRSYVGHQRL LQLAASAFIR NDRGHVLLGQ RSDVMLWAPP SGVVQLGETP ARTLVREVLE ETGLHVVVER LIGLYTGREF EWTYPNGDQA QIVSAFFACR VTGGMLQPDH TEFVSLAYYP PDRLPPLMPR YVRMVRDAFA GRAEAAFD
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