Gene Rcas_0210 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0210 
Symbol 
ID5537672 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp259981 
End bp261024 
Gene Length1044 bp 
Protein Length347 aa 
Translation table11 
GC content59% 
IMG OID640892374 
ProductATPase 
Protein accessionYP_001430361 
Protein GI156740232 
COG category[R] General function prediction only 
COG ID[COG0714] MoxR-like ATPases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.283743 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGGATG GTCACAGGGA ATTGGTAGTA TACTACCAGC ACCCTGAAAC ATCTGTACAC 
GGAAAGTCTG GAATGGAAGA TATCAAAACC ATCGTCGAGC GCATCGCCGC CAATGTCGAG
CAGGTGATCA TCGGAAAGCG CCGCGCCATT GATCAGGCGT TGGCTGCCTT GCTTTGCAAA
GGGCATGTGC TCCTCGAAGA CGTGCCGGGA ACCGGCAAAA CGATGCTCGC TAAAGCCATT
GCGCGATCAA TTGGGTGCAG TTTCAAGCGC ATTCAGTTCA CCCCCGACCT GCTGCCGTCT
GATGTAACCG GCATTTCGAT TTTCAACCAG CGCACCCACG AATTCGAGTT CCGCCCCGGA
CCGATTTTTG CACAGATCGT GCTGGCAGAC GAGATCAACC GCGCAACACC GAAGACCCAG
AGTGCGCTCC TCGAAGCTAT GGAAGAACGG CAGATTACGG TCGATGGCGT CACCCATCCG
CTGCCACAAC CGTTCCTGGT GCTGGCAACG CAAAACCCGA TCGAGTACGA AGGAACGTTC
CCCCTCCCCG AAGCGCAGCT CGACCGCTTC TTTATGCGCA TTCACCTGGG CTACCCGGAG
CGGAAAGACG AAATTGCCAT TCTGCGCCGC CAGCGTCAGG CGCATCCCAT CGAGACGCTG
ACGCAGGTCG TCGCCGCTGA GGACCTGATC GATCTCCAGG AACGCATCAA GTCGATCTAT
GTCGATGAAC TGATTGAGGA GTACATCGTT TCGCTCGTCA CTGCCACCCG CAACCACGAG
GATGTCTACC TCGGCGTGAG TGCGCGCGGA TCGCTGGCGC TCTACCGGGC AGCGCAGGCG
CAGGCAGCGA TCCTGGGGCG CGACTACGTC CTTCCCGATG ATGTCAAAGC ATTGGCGGAA
CCGGTGCTGG CGCACCGTTT GATCATCAAC CCTTCGGCGC GTATCCGCGA CATCAGCGCC
ACCGACGTCA TCTCGGACGT ATTGAAGGCA GTGGCGGTAC CGGGTGCACG CGCCGGACGA
CGCTTCGAGC GTGTCGCGCG GTAA
 
Protein sequence
MPDGHRELVV YYQHPETSVH GKSGMEDIKT IVERIAANVE QVIIGKRRAI DQALAALLCK 
GHVLLEDVPG TGKTMLAKAI ARSIGCSFKR IQFTPDLLPS DVTGISIFNQ RTHEFEFRPG
PIFAQIVLAD EINRATPKTQ SALLEAMEER QITVDGVTHP LPQPFLVLAT QNPIEYEGTF
PLPEAQLDRF FMRIHLGYPE RKDEIAILRR QRQAHPIETL TQVVAAEDLI DLQERIKSIY
VDELIEEYIV SLVTATRNHE DVYLGVSARG SLALYRAAQA QAAILGRDYV LPDDVKALAE
PVLAHRLIIN PSARIRDISA TDVISDVLKA VAVPGARAGR RFERVAR