Gene Rcas_0207 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0207 
Symbol 
ID5537668 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp255080 
End bp256603 
Gene Length1524 bp 
Protein Length507 aa 
Translation table11 
GC content60% 
IMG OID640892370 
Productinosine-5'-monophosphate dehydrogenase 
Protein accessionYP_001430358 
Protein GI156740229 
COG category[F] Nucleotide transport and metabolism
[R] General function prediction only 
COG ID[COG0516] IMP dehydrogenase/GMP reductase
[COG0517] FOG: CBS domain 
TIGRFAM ID[TIGR01302] inosine-5'-monophosphate dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCAGAG GGTCTTTTAT TCCCTGCACC GATACGGAGA AGGAGGTAGA TGTGACAATT 
GACTGGGACG ATAAATACGC GCGCGAAGGG TTGACGTTCG ACGACGTGCT CCTGATCCCG
GCAGAGTCAC AGGTTCTGCC GGGCGAGGTC GATGTCGCCA CGCAACTGAC CCGTTCCATC
AGAATCAATA TTCCGATCAC CAGCGCCGCT ATGGATACGG TTACAGAACA CCGTCTGGCG
ATTGCGCTGG CGCGCGAAGG CGGCGTCGGG TTCATTCACA AAAACATGCC CATCGAAGCG
CAGGCGGAAA TGGTGCGGAA GGTCAAACGC TCCGAGAGCG GCATGATCAC CGACCCGATC
ACGATGGGAC CGGATAAAAC CGTCGGCGAT GCGCTCGATT TGATGGCGGA GTATCGCATT
TCCGGCATTC CAATTACAAC ACCGGACGGC GATCTGATTG GTATCGTAAC CAACCGCGAC
CTGCGGTTCG AGACGGATCG CAGTCGTCCG ATCCGCGATC TAATGACAAC GCGCAATCTC
ATCACTGTGC CCGAAGGCAC CACACTCGAG CAGGCGAAAC AGATTCTGCA TGAGCACCGG
ATCGAAAAAC TGCTGGTGGT CGACCGGCGG GGCAAATTGT CGGGAATGAT CACGGTCAAG
GATATTATGA AGCAGATTGA GTACCCGAAC GCCTGTAAAG ATGCGCAGGG GCGGTTGCGG
GTCGGCGCAG CGATTGGCGC CTCCGGCGAC TATCTGGAGC GTGCCGATGC GCTGGTGCGG
GTCGGGGTGG ATGTGCTGGC GATCGATACC GCACATGGGC ATTCACGCGG GGTGCTTGAT
GCGGTGCTGC GCATTCGCGA GCGCTACCCG GATGTGCAAC TGGTCGCCGG GAATGTCTCG
ACCGGCGCTG CGACGGTGGC GTTGTGTGAG CGTGGCGTCG ATGCAGTGAA GGTCGGGCAG
GGACCGGGAA GTATCTGCAC GACGCGGGTA GTGACTGGCG CGGGCATGCC GCAGATCACG
GCGATTACCG AATGCGCACG CGCGGCGTCG CGGTTCGGCG TTCCAATCAT TGCCGATGGC
GGCATTCGCT ACAGTGGCGA CATTGCCAAA GCCATCGCCG CCGGGGCGCA TACGGTCATG
ATCGGCTCGC TTCTCGCCGG AACCGAGGAG AGTCCAGGCG AAACGATCCT GTATGAAGGG
CGCAGTTACA AGAGTTATCG GGGTATGGGT TCGATTGGCG CCATGCAGCA TGGCAGCGGC
GACCGCTATT TCCAGGGAGG CACAGGGCGG AAACTCGTGG CGGAAGGGAT CGAAGGGCGC
GTCCCCTACA AAGGTCCGCT CAGCGATACG ATCTTCCAGT TGGTCGGCGG GCTGCGATCC
GGCATGGGGT ACGTTGGCGC AAAAGACATC GAGACGATGC GGCGCGAGGC GCGCTTTATT
CGTATTTCGA TGGCGGGATT AATTGAGAGT CACCCCCACG ATGTGACCAT TACGAAGGAA
GCGCCGAACT ACGAGCGGCG ATAA
 
Protein sequence
MRRGSFIPCT DTEKEVDVTI DWDDKYAREG LTFDDVLLIP AESQVLPGEV DVATQLTRSI 
RINIPITSAA MDTVTEHRLA IALAREGGVG FIHKNMPIEA QAEMVRKVKR SESGMITDPI
TMGPDKTVGD ALDLMAEYRI SGIPITTPDG DLIGIVTNRD LRFETDRSRP IRDLMTTRNL
ITVPEGTTLE QAKQILHEHR IEKLLVVDRR GKLSGMITVK DIMKQIEYPN ACKDAQGRLR
VGAAIGASGD YLERADALVR VGVDVLAIDT AHGHSRGVLD AVLRIRERYP DVQLVAGNVS
TGAATVALCE RGVDAVKVGQ GPGSICTTRV VTGAGMPQIT AITECARAAS RFGVPIIADG
GIRYSGDIAK AIAAGAHTVM IGSLLAGTEE SPGETILYEG RSYKSYRGMG SIGAMQHGSG
DRYFQGGTGR KLVAEGIEGR VPYKGPLSDT IFQLVGGLRS GMGYVGAKDI ETMRREARFI
RISMAGLIES HPHDVTITKE APNYERR