| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0201 |
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| Symbol | |
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| ID | 5537662 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 245549 |
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| End bp | 247930 |
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| Gene Length | 2382 bp |
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| Protein Length | 793 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892364 |
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| Product | laminin G, domain-containing 2 |
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| Protein accession | YP_001430352 |
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| Protein GI | 156740223 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.317242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 36 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGGATCAA CATGGCAAAA CCAGCGCTCA GGCGCTTTAT GGGCAACGCT CATCGTTATC
GTTGTATTGA CCGCTTTGGC GACGCTGCCG CCGCGTCGCG TCGAAGCGCA GCAGGGATAT
TCGCTCCGCT TCTATGGGAC TGGCGCCCGC GATGTTGATC GTGTCAAGAT ACCACTGGAC
GCACCGCCCC GTCCTGCCGA TATTGGGGAG ACCGATTTTA CTTTCGAGTT CTGGATGCGC
GCACTTCCTG GCGCCAATAC CAGCGGTCCA TGCGTTGCCG GGCAAGACTC CTGGATCAAT
GGCAACGTCA CGTTCGACCG CGACATCTTC GGTACAGGCG ATTACGGCGA CTATGGCATT
TCGATCTACG GCGGACGTAT CGCGTTCGGT GTCGCAACGT CCTCTGCAAG CCAGACGATC
TGCGGCGCAA CGAATGTCGC CGATGGGCAG TGGCATCACA TTGCTGTCAC TCGACGGTTC
AACGATGGGC AGTTGACCAT TTTCGTCGAT GGCGCGCTCG ATGCGCAGGC GACCGGTCCG
GTCGGCACTA TCAGTTACCG GGACGGGCGT ACTGCCCAAT GGCCCAATGA GCCGTACCTG
GTCATCGGCG CCGAAAAGCA CGACTATGAT CGCGCTGCCT ACCCTTCGTT CAATGGCTGG
ATCGATGAGG TTCGTCTGTC GCAGGCGTTG CGCTATACCG CGCCGTTTTC TCGCCCGACA
CAACCATTCG TTCCTGATAC GCTGACTGTT GCACTCTACC ATTTTGATGA AGGCGCCGGG
GTCGTTGTTA ACGATACGTC CGGCGTGGTC GGCGGACCCA CAAACGGAAC ACTCTTCGTT
GATCCGCTGT CGGGCGGTCC GGTCTGGTCT ACCGAAACGC CGCCCTGGAC AGGCGTCGAT
CCGCCAACCG ACACGCCCGC TCCGCCGACA GGGACGCCCA CGGCGCTGCC GACGGGGACG
CCTACGGCGA CGGCTGTGCC GCCGACGGCG ACGAATACAC CCGTTGCGCC GACGGCGACG
AATACGCCCG TTGCGCCGAC GGCGACGAAT ACGCCCGTTG CGCCGACGGC GACGAATACG
CCCGTTGCGC CGACGGCGAC GAATACGCCC GTTGCGCCGA CGGCGACGAA TACGCCCGTT
GCGCCGACGG CGACACCAAC TCCCACCAGC GATGGTCCGG CAGTAAACCT GTTGCAGAAC
GGCGGGTTCG AACTCGATGC CAACGGCGAC ACGCGCCCCG ATGACTGGAC GACGAATGCA
CGGGTGATCC GAAGTGCAGC AGTGGTGCGC AGCGGCAGTT ACGCCATGCG CCACTATGCT
ACCGATAATG CCAACTATAC GATTTCTCAA ACCATTACAG GCGTCACAGC GGGAACAAAC
TATGTCCTGC TCGGTTACGT CAACATCCCT CCCAGCGGTG ATGCATTCAC TTTCAGGATA
CGGGTGCGCT GGCTGCGTTC CGACAATACG ATCATTCGCA CCGATACGCC GCGCAGTTTC
ACCAATAGCA CCGGCGGCGT GTGGGAGATG GCGCGTGGCG TCTATGCTGC GCCAACCGGC
GCCGTTCGAG CGCGGGTCGA GATGAATGTG TCCAGTCTGA ATGCAACAGT GTACGCCGAC
GATGTTGCCT TTGGTCCGGC GTCAGGCGGC GGATCGACGC CAACGAACAC GCCTGCGCCG
CCAACAGCGA CGAATCTTCC GGCATCGCCA ACCGCTACTC CCACGCCATC GTCTATTGCC
GGAGCCAATG GCGCGCTGAC ATTTGACGGC ATCGACGACG AGGCAAGCAA TGCGGCATTT
TCGATGAACG GCAGGTTTAC TGCTGAAGCC TGGGTGCGTC CTTCGAGCGC CAATCAATCC
TCGATTGTGA TCGTCACCGG CGATGGATCG CGCGGCTGGT CGCTCGAACT CACTGATGGT
CGGGCGACAT TGTGGGTTGC GAACAGCGCC GGCGTCTGGT CGTTCGTTCG TAACGACAGC
GTTGTTTTGC AAGCCAATCA GTGGTACCAC GTTGCAGCAA CGTATGATAA CGGCACTGCG
CGCGTGTTTG TCAACGGCGT TGCCGGGACC TCCGGTTCGG TTGGAACGGT GAGTCATATG
CCAGTTGTGC GCCTAGGGGG AATGACCGGC TACGGCTTCT TCGCCGGCCA AATCGACGAT
GTGCGAATCT CGCGGATCGC GCGCTATACC GGAAATTTCA CGCCGCCATC GGCGCCGCTC
ACCGCAGACA CCGAGACCGT CGCGCTCTAT GTGTTCGACG AGGAGAGCGG GCAGATGGCG
AGTGATGTGT CGGGGAATGG GTATCACCTG ATGCTCGGAC GGAACGCAGG CGTCGACAGC
GCCGACCCTC AGCGCGTCGG ATCGACCGCG CCAGGTAGAT AA
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| Protein sequence | MGSTWQNQRS GALWATLIVI VVLTALATLP PRRVEAQQGY SLRFYGTGAR DVDRVKIPLD
APPRPADIGE TDFTFEFWMR ALPGANTSGP CVAGQDSWIN GNVTFDRDIF GTGDYGDYGI
SIYGGRIAFG VATSSASQTI CGATNVADGQ WHHIAVTRRF NDGQLTIFVD GALDAQATGP
VGTISYRDGR TAQWPNEPYL VIGAEKHDYD RAAYPSFNGW IDEVRLSQAL RYTAPFSRPT
QPFVPDTLTV ALYHFDEGAG VVVNDTSGVV GGPTNGTLFV DPLSGGPVWS TETPPWTGVD
PPTDTPAPPT GTPTALPTGT PTATAVPPTA TNTPVAPTAT NTPVAPTATN TPVAPTATNT
PVAPTATNTP VAPTATNTPV APTATPTPTS DGPAVNLLQN GGFELDANGD TRPDDWTTNA
RVIRSAAVVR SGSYAMRHYA TDNANYTISQ TITGVTAGTN YVLLGYVNIP PSGDAFTFRI
RVRWLRSDNT IIRTDTPRSF TNSTGGVWEM ARGVYAAPTG AVRARVEMNV SSLNATVYAD
DVAFGPASGG GSTPTNTPAP PTATNLPASP TATPTPSSIA GANGALTFDG IDDEASNAAF
SMNGRFTAEA WVRPSSANQS SIVIVTGDGS RGWSLELTDG RATLWVANSA GVWSFVRNDS
VVLQANQWYH VAATYDNGTA RVFVNGVAGT SGSVGTVSHM PVVRLGGMTG YGFFAGQIDD
VRISRIARYT GNFTPPSAPL TADTETVALY VFDEESGQMA SDVSGNGYHL MLGRNAGVDS
ADPQRVGSTA PGR
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