| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0198 |
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| Symbol | |
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| ID | 5537659 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 238604 |
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| End bp | 242422 |
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| Gene Length | 3819 bp |
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| Protein Length | 1272 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892361 |
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| Product | DNA polymerase III, alpha subunit |
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| Protein accession | YP_001430349 |
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| Protein GI | 156740220 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0587] DNA polymerase III, alpha subunit |
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| TIGRFAM ID | [TIGR00594] DNA-directed DNA polymerase III (polc) |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0979698 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACGACT TCGTTCACCT GCACGTTCAC TCCGAATACA GCCTGCTCGA CGGATATGCC
GCTACCGGCG CCATCGCTGC ACGCGCGGTC GAACTGGGGA TGGACAGCAT CGCCTTGACC
GACCACGGCG TCATGTACGG CGCCATGGAG TTCTACACCA ACGCAAAGAA GGCCGGCATC
AAGCCGATCA TCGGGCTGGA AGCCTACATG GCGCCTGGAT CGCGTCGGGA AGCGACGAGC
CGCGGCGCAA AACATTACTA TCACCTGCTG TTGCTGGCGA AAGACGAGAT CGGCTACCGC
AACCTTGTGC GCCTGACGAC GCGCGCCCAC CTTGACGGCA TGGGAAAGGG GGTCTTCGCC
CGTCCGCGCA TTGATCGCGC ATTGCTCGAA CAGCACCACG AGGGGTTGAT TGTCACATCA
GCATGCATTG CCGGCGAAGT CATTCAGCGC CTGAAAGAAG AGCAGAAGGA ACAGGCGCGC
GAAATCGCCG CCTATTACCG CGATCTGCTC GGGCCCGACA ACTATTTCCT CGAACTGCAA
CTCCACGATA ACACGCCGGA ACTCGAAGCG ATCAACGACG AACTGGTGCG CATCGGGAAA
GAACTGGGCA TTCCGCTGGT TGTGACGAAT GATACCCACT TTGTGCGCCC TGAGGATGTC
GACGCGCACA AGATGATCCT GGCGCTCGGC TACAACATGA CCCTCAAGGA GTTGTGCGCG
AAGCAGTATG AAATGGACGC GACGTACCAC ATTATGTCCG GCGAAGAGAT GTGGCGACGG
TTCAAAAAGT ATGGGACGAC TCCGCTCGAG AATACCCGCC GGATCGCCGA GCGCTGCAAC
CTGAACCTGG AGTTCGGTCG CGTCCAGTTG CCGACCATCG ACATTCCCGA AGGGCACGAC
GCCTCTTCCT ACCTGCGGTT CGTCTGCGAA GAAGGGTTGA TGCGACGCTT CAACGGCAAT
CCGCCTGAAG CGTACATGAA GCGTCTCGAG TACGAACTCG ACGTGATTAA TCAGACGGGA
TTCCCCGATT ATATGCTGAT CGTCTGGGAC TACGTCAAGT TCGCGCGCGC ACGCGGCATT
CCCTGCCTGC CACGCGGGTC GGCGGGTGCG TCGCTGATTC TCTACTGCCT GGGCATCACC
GATGTCGATC CGGTCAAGAA CAAACTGCTC TTCGAGCGCT TCCTCAGCCC GGAACGCCTG
GAGATGCCGG ATATCGACAT CGATTTCGCC GATAGCCGTC GCCACGAGGT GCTCGAATAT
ATCGCCGAAC GGTATGGACG CGAGAACACC GCGCAGATCA TTACGTATGG CACGTTGGGC
GCCAAAGCGG CCATCCGCGA TATCGGGCGG GTGCTGGACA TCCCGCTCAG CGAGGTTGAT
CGCGTCGCCC GACTCATTCC GGCGCTTCCG GTCGGGACGA CGATTGCGCA GGCGCTCGAA
CGGGTGCCGG AGCTGAAACA GATCTACGAG ACCAACCCCG AACTGGCGAA CTTGATCGAT
TGGGCGCAGA AGGTCGAAGG GCGGATGAAG AGCGTCGGCA CCCACGCCTG CGGCGTCGTG
GTCAGTCGCA CCCCGCTCGA AGAAATTGTC CCGCTCCAGC GCACGACGAA GGACGAGAAC
GCGCTGATGG CGGCATTCGA GGGACCCACG CTGCAAAAGA TGGGTTTGCT GAAAATGGAC
GTCCTGGGGC TGACCAACCT CTCGGTTGTG GCTGAGGCGT TGCAGTATAT CGCGCAGACG
ACCGGCAAAA CGATGGAACT CGCCGACATT CCACTCGACG ATCCAAAGGT GTTCGAGGCG
CTCGGTCGCG GCGAAACGAC GAATGTGTTC CAACTGGAAA GTCCAGGGAT GACCCGCTAT
CTGATGCAAC TCAAGCCAAC CCGCGTCGAA GACCTGTACG CGATGGTCGC GCTGTACCGT
CCTGGTCCGC TCGAACAGAT TCCGGTCTAT ATTCACAACA AGAACCATCC CCAAGACATC
ACCTACCTCC ATCCGATCCT GAAACCAATC CTTGAAGACA CCTACGGCGT GATCGTCTAC
CAGGAACAGA TCATGCGCCT GCTTCAGGAG GTCGCCGATT ATACGCTTGG TCAGGCGTAT
ATCGTCATCA AAGCCATCAG CAAGAAAGAT AAGAAGTTGA TGGCGGAGAA CGAGGTCAAG
TTCAAACAGG GATGCCTCAG AAAAGGGTTG ACCCAGGAGC AGGCGGATCA GTTGTGGGAA
TTGATCCTGC CATTTGCCGG CTACTCCTTC AACCGTCCAC ACTCGACGCT CTATGGACTG
CTGAGTTATC AGACCGCCTG GCTCAAGGTG AACTATCCGG TCGAGTACAT GGCCGCCGTG
CTGAAGGGCG CCGGCGGCGC GACCGACGAC ATCGCCAAAG CGGTCAACGA ATGCCGTCAG
CGCGGCGTTC CGGTGCTTGG ACCCAATATC AACGACAGCG CATTCGATTT TACCATCCGC
GAGTTCCGCG ATCCGTCGGA CGGGAACCTC AAACGCGGCA TCCTGTTCGG TCTGGCAGCG
ATCAAGAATG TCGGCGCCGG ACCGATTGAG GCAATCCTGC GCGAACGCGA CGCCGGCGGT
CCGTTTCGCT CGCTCGAAGA TGTGTGCGAG CGGGTGGATC GTCATGCGCT GAACAAGCGT
GTGCTCGAAA GCCTGATCAA GTGCGGCGCG CTCGACGCAC TTCCCGGCAA TCGCTGGCAG
AAGCTGGAGA TTCTCGATGC CGCAATGGAG GCGGGGGCGC GCGCGCAGAA GAACCGCGAA
ACCGGGCAGA TCGACATGTT TGGCGGTCTT GTGTCTCAGG CTGCCGAGGT CATCGCCGCT
CTTCCGTTGC CGGTCATTGA AGAAACTGCG GAACGCCGCA AGGAAAAACT GGCGTGGGAA
AAAGAGTTGC TCGGCGTGGT CTTTTCGAGC GATCCGCGCA AAACGGCGCT GGAACGCGCA
AATATTGAGC ATCGCGTGCC GCTTGCCGCC ATTCGCAACG CTGAAGGGTT GCCGGACTAT
CTGGGCAAGG TGCATACCTT TGCCGGGATG CTGACGCGCG TTCGCATGAT TGCGACCAAG
AAGGGCGACA CGATGCTGGT TGCGACGCTC GAAGACGAAA ACGAGGATAC GGTCGAACTG
GTCGCCTTCC CGAAAGCCTG CGAGAAATAC CGCGACCTGC TGCGGCAGGA TGCATTGCTG
ATCGTGCAGG CAAAGGTCGA TGAACGGAAT GGTGTGGTGC AATTGGTGCT CGAAAGCGCG
ACCCTCCTCG ATCTGTCGGC GGCTGAACCG CCGCCGGCAG CGCCCGAAAT GGATCTCGAA
GGGCTGGCGG AAGAAGGGGA GCCGGAGGTG ATAACGACTG CCCTCCATGA CGCCTCAGAA
GAGCCGGCTG CGCCAACGGA TGCCGCCGGT GCAGCGCCGG CGCCGGCAGC GCCGCCAGAA
GTGCATACGC CGCCCGCTTC ATCCGCGAGC GCACCACCGC CGATTACCAC CCCGATCTCG
ATCATCAAAC CGCACGCACC ATCGCGCTCC CGGACAGCGC CTGCCTCGAA CGGTAATGGG
CACGATCATC ACGCTCCGGC AACGAACGGT GACACAGCAT CAGGACGCAC GATGCGGCTG
CGCTTCCAAC GCTCTGCCGA TCAGGAAGCG GACATTCAGT TGATGCAGCA CGTCTATGAT
CTGTTGCGCG GACGCGATGG CGCCGATCAG GTGGTGATTC AGCTCGACAC CCTTGATCGC
CGGGTGTTGC TGCGCATGCG CCAGACGATC ACCTGCGACG ACGGATTGAT CGATGCGCTG
CGCGGCGTGC TTGGCGAAGC GTGCGTGTCA GTGGAGTAG
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| Protein sequence | MNDFVHLHVH SEYSLLDGYA ATGAIAARAV ELGMDSIALT DHGVMYGAME FYTNAKKAGI
KPIIGLEAYM APGSRREATS RGAKHYYHLL LLAKDEIGYR NLVRLTTRAH LDGMGKGVFA
RPRIDRALLE QHHEGLIVTS ACIAGEVIQR LKEEQKEQAR EIAAYYRDLL GPDNYFLELQ
LHDNTPELEA INDELVRIGK ELGIPLVVTN DTHFVRPEDV DAHKMILALG YNMTLKELCA
KQYEMDATYH IMSGEEMWRR FKKYGTTPLE NTRRIAERCN LNLEFGRVQL PTIDIPEGHD
ASSYLRFVCE EGLMRRFNGN PPEAYMKRLE YELDVINQTG FPDYMLIVWD YVKFARARGI
PCLPRGSAGA SLILYCLGIT DVDPVKNKLL FERFLSPERL EMPDIDIDFA DSRRHEVLEY
IAERYGRENT AQIITYGTLG AKAAIRDIGR VLDIPLSEVD RVARLIPALP VGTTIAQALE
RVPELKQIYE TNPELANLID WAQKVEGRMK SVGTHACGVV VSRTPLEEIV PLQRTTKDEN
ALMAAFEGPT LQKMGLLKMD VLGLTNLSVV AEALQYIAQT TGKTMELADI PLDDPKVFEA
LGRGETTNVF QLESPGMTRY LMQLKPTRVE DLYAMVALYR PGPLEQIPVY IHNKNHPQDI
TYLHPILKPI LEDTYGVIVY QEQIMRLLQE VADYTLGQAY IVIKAISKKD KKLMAENEVK
FKQGCLRKGL TQEQADQLWE LILPFAGYSF NRPHSTLYGL LSYQTAWLKV NYPVEYMAAV
LKGAGGATDD IAKAVNECRQ RGVPVLGPNI NDSAFDFTIR EFRDPSDGNL KRGILFGLAA
IKNVGAGPIE AILRERDAGG PFRSLEDVCE RVDRHALNKR VLESLIKCGA LDALPGNRWQ
KLEILDAAME AGARAQKNRE TGQIDMFGGL VSQAAEVIAA LPLPVIEETA ERRKEKLAWE
KELLGVVFSS DPRKTALERA NIEHRVPLAA IRNAEGLPDY LGKVHTFAGM LTRVRMIATK
KGDTMLVATL EDENEDTVEL VAFPKACEKY RDLLRQDALL IVQAKVDERN GVVQLVLESA
TLLDLSAAEP PPAAPEMDLE GLAEEGEPEV ITTALHDASE EPAAPTDAAG AAPAPAAPPE
VHTPPASSAS APPPITTPIS IIKPHAPSRS RTAPASNGNG HDHHAPATNG DTASGRTMRL
RFQRSADQEA DIQLMQHVYD LLRGRDGADQ VVIQLDTLDR RVLLRMRQTI TCDDGLIDAL
RGVLGEACVS VE
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