| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0196 |
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| Symbol | |
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| ID | 5537657 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 234776 |
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| End bp | 236122 |
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| Gene Length | 1347 bp |
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| Protein Length | 448 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892359 |
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| Product | peptidase M20 |
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| Protein accession | YP_001430347 |
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| Protein GI | 156740218 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 0.143617 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 40 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACTGAGC CAGCCGTCAT CTCGACCGAT CAACTCATCT GCGATCTCGA TCACCTCATC
AGCCTGCCGG GCAGCCCTGG TCAGGCTGAT GATCTACGCG CCGTCGCCGC ACGCATTGCG
GCAATGATGC GCAGCCGCGG CTTGCACGTC GAAGTGCGCC CGACCTCCGG TGCGCCGATT
GTCATTGGTT GGCGCGGCGG GCGTCAACCA TACACCGTTC TGCTCTATCA TCACTATGAT
ACACCCTCTC CCGGTCCCTG GCGCGCCTGG CGCCACGATC CGTTTCAGTT GGCGGAGCGC
GATGGCATTG TGTATGGGCG TGGCGTGGCA GACGGGAAGG GACCGCTGGC GGCGCACCTG
AATGCCATCG CCGCCTTGAT CGATGCAGAA GGTGAACTGC CTTGCGGTGT CGTGGTGGTT
GCCGAGGGCG ACTATCTGAC CGGCAGCCCA TATCTTGGCG CTCTGATTGC CGACCGCCGC
GCTCTCTTCA AAGCCGACGC CTGCCTGGCG AGCGGGGGCG ACCGCGACGC CGGCGGGCAA
CCGTTCTGCT ACAGCGGCGC AAAGGGGTTG GTGCAGGTGC TGTTGCGCGT GCAGCAGTCG
CAGAACCCCC TGCCCGCCGG ATTGGCAGCC AGCATCCCCA ACCCGCTCTG GCGCCTGATC
TGGGCGCTCA ACCAGATCAA GACCGACCAG GAAGAGGTGC TGATCGGCGG ATTCTATGAT
GCTATCGAAG GTCCCACCAC TGCTGAGAAC CGCATCCTGC GCACGGTGTT CGCCGATGAG
ACCGGGCGGC GCAATGCCTG GAACGTCGAT CAGTTCCTCT TCGGGTTGAC CGGTGCGCCG
TTGGTGCGCT CGGAAGTGAC CCTGCCGACG TGCAATATCA ATCTGTTGCA AACTGAGCCG
ATGGGCGATC CTCCGCTCAT TCCGCGTAGC GCCCTCGCGC GACTGGATTT TCAACTCGTT
CCCCGGCAGT TCCCGCAGAT GGTCGTCGAG GCGCTCCAGG CGCATCTTGC CGCTAAAGGA
TTATCCGATA TCCTGGTTGA ACGACTGCCC GGCGGCTATC CTCCTGCTCA GTCGCGGATT
GACGATTCCT TTGTGCAGTT GGTGAGCGAT GTCGGCAGGT ATATCCACGG AGCGCCACTC
ACCATCCTGC CGCGCGGTCC GTTCAACCTG CCGTTGTTCT ATTTTGCCGA AGCGTTTGGC
ATTCCGGTCG CTTCCGTTGG TGTCGCGCGT CCGTCGAGCG CCATTCTTGG CGCAAATGAA
AACATCCCGC TTCCCGATCT GGTGCGTCAT GGTCAGCATC TGATCGAGGT GCTCTACGCA
TGCGCCGCCG CACATGCAAG CGCCTGA
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| Protein sequence | MTEPAVISTD QLICDLDHLI SLPGSPGQAD DLRAVAARIA AMMRSRGLHV EVRPTSGAPI
VIGWRGGRQP YTVLLYHHYD TPSPGPWRAW RHDPFQLAER DGIVYGRGVA DGKGPLAAHL
NAIAALIDAE GELPCGVVVV AEGDYLTGSP YLGALIADRR ALFKADACLA SGGDRDAGGQ
PFCYSGAKGL VQVLLRVQQS QNPLPAGLAA SIPNPLWRLI WALNQIKTDQ EEVLIGGFYD
AIEGPTTAEN RILRTVFADE TGRRNAWNVD QFLFGLTGAP LVRSEVTLPT CNINLLQTEP
MGDPPLIPRS ALARLDFQLV PRQFPQMVVE ALQAHLAAKG LSDILVERLP GGYPPAQSRI
DDSFVQLVSD VGRYIHGAPL TILPRGPFNL PLFYFAEAFG IPVASVGVAR PSSAILGANE
NIPLPDLVRH GQHLIEVLYA CAAAHASA
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