| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0188 |
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| Symbol | |
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| ID | 5537649 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 224482 |
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| End bp | 225348 |
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| Gene Length | 867 bp |
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| Protein Length | 288 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892351 |
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| Product | CRISPR-associated Csm3 family protein |
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| Protein accession | YP_001430339 |
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| Protein GI | 156740210 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG1337] Uncharacterized protein predicted to be involved in DNA repair (RAMP superfamily) |
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| TIGRFAM ID | [TIGR02581] CRISPR-associated RAMP protein, SSO1426 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 33 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGTCGCGTG AACCGATCTA TTCCTTCGCC GCACTGCACA ATCGCCTGAC GGTGCGCGGT
GACCTGCTGG CGCTCACGGC GCTGCGCATC GGCGCGGGGC GGGCAACTGA GATCATCGCC
AACGACCTGC CGGTGCTACG CGATGCCTTC GACCGACCCT TCATCCCCGG CGCGTCGCTC
AAAGGCGCTC TGCGCGCGCA GGTTGAGTCC CTCGTGCGCG CCGTCCAGCC CGATCAGGCG
TTCGACCTCG AACAAATCGA AGCCCATATG CGCCGAGAGA TCAGCCGGTT GAAAGAGCAG
CACGATGATG ATATGGAACT GAGCAAAGCG ATCTGGCGCG CCTCAACTCT GATCGACCTG
ACCTTCGGCG CGCCGTGGGT CGCGGGGCGG GTGTTCTTCA AGGATGCACA GGTTGACCCC
AGGCTCTGGT TTGGTCAGTT CGAAACGCGC AACGGCGTCG GCATCAACCG CGATACCGAA
ACGGCTGAAC CTGGGCTGCT CTACGATTAC GAGGTCGTTC CTGCCGGCGC GCGCTTCCAT
TTTGATCTGG TGGTCGAGAA TGCGGCGCCA TGGCAACTGG GTATGCTGCT GGCGGCGCTC
AAGCCATGGC AGCGCGGCGA CGTACAGATC GGCGGGTTCC GCTCGCGCGG TTTGGGGTAT
GTGCAACTGG TCGGGCGTGA GGGACGCGAA GCGCCGGAGA TTCGTTACAT GGCTGTGCGC
GAAGGCGTGG CTGGTGTCGA TGATGTCATT GCCTGGCTCA ACGGCGGCGG CGAGGCAGTC
GGCGCCGATC AAGAGCGGGA ATGGGTTGCC GCGTTCCGCT CAGCCCTGGA GCAACCTGAG
CAGGCGAAGG AGATGATCAA TGCATAA
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| Protein sequence | MSREPIYSFA ALHNRLTVRG DLLALTALRI GAGRATEIIA NDLPVLRDAF DRPFIPGASL
KGALRAQVES LVRAVQPDQA FDLEQIEAHM RREISRLKEQ HDDDMELSKA IWRASTLIDL
TFGAPWVAGR VFFKDAQVDP RLWFGQFETR NGVGINRDTE TAEPGLLYDY EVVPAGARFH
FDLVVENAAP WQLGMLLAAL KPWQRGDVQI GGFRSRGLGY VQLVGREGRE APEIRYMAVR
EGVAGVDDVI AWLNGGGEAV GADQEREWVA AFRSALEQPE QAKEMINA
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