| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0181 |
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| Symbol | |
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| ID | 5537642 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 217680 |
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| End bp | 218657 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 640892345 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001430333 |
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| Protein GI | 156740204 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.639488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 24 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACG AACGTTTCCT GATCACCGGC GCGCTGGGAT GTATCGGCGC CTGGACGGTT
CGTAACCTGG CGCGCGAAGG GACGCCGGTC GTTGTCTTCG ACCTGGCGAA CGATCCGCGC
CGCCTGAAGC TGATTATGTC CAACGAGGAA TTGGCGCAGG TGACGTTTGT GACCGGCGAT
ATTACTGATC TGGAAGCACT CGAACGCGCG CTCGACGAGC ATGCCATTAC GCGCGTCATT
CATCTGGCGG CGCTTCAGAT ACCGTTTGTG CGCGCCAATC CGCCGCTTGG CGCGCGCGTC
AATGTCGTCG GTACGGTCAA TGTGTTCGAG GCGGTGGCGC GTCGCCGCGA CCGGATCGGC
AGCGTGGTCT ATGCTTCGTC GGCAGCGGTG TACGATGCAG TCGACGCCGG TGCGTCCGGC
GTGGTTGCGC ACGGCGCTAT TGGGCATCCG ACGACGCTGT ATGGCGTGTT CAAGCAAGCC
AACGAAGGCA CGGCGCGCGT CTACTGGCAG GATGCGCGTG TACCGAGCAT TGGTCTGCGC
CCATACATCG TCTACGGTCC GGGGCGCGAC CAGGGATTGA CGTCGAGTCC GACGAAGGCG
ATGGTTGCGG CTGCGCTCGG CAAAGCGTAC CACATTCCGT ATGGCGGGCG CGCCGCCTAC
CAGTACGCCG ATGATGTGGC GCGCACCTTC ATCGCCTGCG CGCGCGCGCC GTTCGAGGGC
GCCGAGATTT TCAACCTGCG CGGCAGTGTG GCGACGATGG GCGAGATAGT GGCAGCCATC
GAGGCGGCGG CGCCGGAGAC GCGTGGGTTG ATTACCTTCG ATGAGAAGCC GCTCCCCTTC
CCGGAAGAAT TCGACGCCAC GCCACTCGAG CGGTTGATCG GCGCGTTGCC GTTTACGCCG
TTGGAACAGG CGGTCGCCGA GACGATTGCA CTGTTTCGCC AACGGATCGC AGAAGGCGTT
ATGCCCGACA CGGTGTAG
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| Protein sequence | MHNERFLITG ALGCIGAWTV RNLAREGTPV VVFDLANDPR RLKLIMSNEE LAQVTFVTGD
ITDLEALERA LDEHAITRVI HLAALQIPFV RANPPLGARV NVVGTVNVFE AVARRRDRIG
SVVYASSAAV YDAVDAGASG VVAHGAIGHP TTLYGVFKQA NEGTARVYWQ DARVPSIGLR
PYIVYGPGRD QGLTSSPTKA MVAAALGKAY HIPYGGRAAY QYADDVARTF IACARAPFEG
AEIFNLRGSV ATMGEIVAAI EAAAPETRGL ITFDEKPLPF PEEFDATPLE RLIGALPFTP
LEQAVAETIA LFRQRIAEGV MPDTV
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