Gene Rcas_0171 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0171 
Symbol 
ID5537632 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp209736 
End bp210353 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID640892335 
Productphosphoglycerate mutase 
Protein accessionYP_001430323 
Protein GI156740194 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0406] Fructose-2,6-bisphosphatase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value0.693324 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCACCG CTCTCTGGCT TGTTCGACAT GGGCAAACGC CGCTCAACAA ACAACGTCGC 
TATCAGGGAC GAACCGATAG CCCGCTGACC TCGTTCGGCG TCTTGCAAGC GCAGGCATTG
GCGCGTCGTC TGCGGCGAAT TCCCCTGACC GTTGCGATCA TCAGCCCTTG CAAACGAGCG
CATGACACTG CGGCTGAAAT AGTGCGCGGG CGGGAAATCC CGGTGGTCGA AGATGTGCGC
TGGAGTGAAA CGAACCATGG GCGCTGGGAA GGATTGACGT ATGCAGAGGT GCGCGCGCGC
TTTCCTGAAG AAGCTGCCGC GCGCTTCGCC GATGCGTTGC ACGGGCGGGC GCAGGGCGGC
GAAAGCCTCG CTGAAGTCAA TGCGCGCATT CTGGAGGCAT GGCACAGCCT GTTCCCTGCA
TATCCCGGCG GACGCATCCT TGTCGTTACC CACGCCACTC CTATTCAACT GATTCTGTGC
CGTATCACCG GTCTGGCGCC GACCGATCAC TGGCGCTGGC GTGTCGATCT GGGGAGCCTG
ACGGCAATCG ATGTCTATGG CGGCGGACCA ATCGTGCGCA CGGTCAACGA AATACCATGG
TTGGGAATGA GGGAATGA
 
Protein sequence
MRTALWLVRH GQTPLNKQRR YQGRTDSPLT SFGVLQAQAL ARRLRRIPLT VAIISPCKRA 
HDTAAEIVRG REIPVVEDVR WSETNHGRWE GLTYAEVRAR FPEEAAARFA DALHGRAQGG
ESLAEVNARI LEAWHSLFPA YPGGRILVVT HATPIQLILC RITGLAPTDH WRWRVDLGSL
TAIDVYGGGP IVRTVNEIPW LGMRE