| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0169 |
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| Symbol | |
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| ID | 5537630 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 207046 |
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| End bp | 207900 |
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| Gene Length | 855 bp |
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| Protein Length | 284 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892333 |
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| Product | spermidine synthase-like protein |
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| Protein accession | YP_001430321 |
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| Protein GI | 156740192 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0421] Spermidine synthase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.387989 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 26 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCGTCAC AAGGCGCAAC CACTCACCTT GCATCGTACA CCGCCTCCCT TTCCCGGCGC
CTCGCCTGGC TCCGCACCCT TCCTGACGGC GTCATTTATG ATCGATCATT GCCGCAAACG
CGCCTCTGGG TTATCAAGGA TGCATCGTTT ATCAGCCTTT TTTTTCTGAA CCCGGAAACC
GGCGCACTCG ATGGACCAAT GTCGCGGATC GATATTGAGC GACCGCTGCA TCTCCTGGCG
CCCTATACCC GTGCGCTCCT GCTCACGCTT CTCTGGCGTC CGGCGCCACA CCGCATCTGC
ATGCTCGGTT TTGGCGGGGG ACGCATGTCG CTGGCGCTGC ACGCTCATCT CCCTGATGTG
AACATCGACA ATGTCGATGT TGATCCGGCA TTCGAGACTA TCGCCGCCGA CTATTTCGGT
GTGATATTCG ACGAACGGCA GCGCCTCCAC ATCGCCGATG CGCAGGCGTT TCTCCAATCG
ACGATGCACC GTTATGACAT TATTATTATG GATGCGTTTA GTGATGCTCG TGACAATCTG
AATCATCTGG CGACGGCGGA GTTTTATGCG CTCTGTCGGG AACGGTTGCG CCCCGGCGGT
GTCATCGGCG TCAACTTCCT GCGCAGCGAT CCGCATCTTT CCACGAAAGT GGACGCCTTT
CGCGCTGCGT GGCACACCAC ACTGGCGACG CCGCTGCGCC ACTCTCTCGT TGCGTTTGGC
GTGGGGCGTA TGCCCGCGCC GGCCACCGAA CTCACCACCC GCGCATGCGC TCTGGCGCAG
CGGTACGGCT TCGACGCCGA TCTGAGCAAT CTCGCGGCGA CGTTGCGCCC ATTGCGCGCG
ATCGACCTCT GGTAA
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| Protein sequence | MASQGATTHL ASYTASLSRR LAWLRTLPDG VIYDRSLPQT RLWVIKDASF ISLFFLNPET
GALDGPMSRI DIERPLHLLA PYTRALLLTL LWRPAPHRIC MLGFGGGRMS LALHAHLPDV
NIDNVDVDPA FETIAADYFG VIFDERQRLH IADAQAFLQS TMHRYDIIIM DAFSDARDNL
NHLATAEFYA LCRERLRPGG VIGVNFLRSD PHLSTKVDAF RAAWHTTLAT PLRHSLVAFG
VGRMPAPATE LTTRACALAQ RYGFDADLSN LAATLRPLRA IDLW
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