| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0165 |
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| Symbol | |
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| ID | 5537626 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 201010 |
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| End bp | 202734 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892329 |
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| Product | binding-protein-dependent transport systems inner membrane component |
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| Protein accession | YP_001430317 |
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| Protein GI | 156740188 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG4986] ABC-type anion transport system, duplicated permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.336199 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACTGCGC CAACTCGACG AGTGTTCACG CCGTCCCCGC CTGACAGGCC TCGCTTTACC
GTGGCGGATG GCGTGATTCT GCTCATCATT GTCGGGCTGC TTGCGCTTGG CATCTGGGCT
GCCGAGTCTG CTCCCGCCGA AGTGCGCGGA CCGGAGATCA GCCTGTCAAT CAGTGCGTTA
CCGTTCTATG CGTTGCATTC GGTTGGGCGC ATGGCGGCAG CGTATGTGCT ATCGCTCGTG
TTTACCCTGA TCTACGGCTA CGTTGCCGCC TACAATCCAC GCGCCGAGCG GGTGCTCATG
CCGTTGCTCG ATGTGTTGCA GAGTGTGCCG ATCCTCTCGT TCCTGCCGAT CGTCCTGCTG
AGTCTCACGG CGATCCTGCC AGAGGGGATT GCGGTCGAAT TGGCGTCTAT TGTGCTCATC
TTCACCAGCC AGGTCTGGAA CATGACCTTC GCCTGGTATC AGTCGCTGAC GACCGTGCCG
CGCGAACTGC GCGAAGCGAG TGCGATCTTC CGTTTTACCC GCTGGCGCCG GTTGACGGTG
CTGGAACTGC CATTTGGCGC TCTGGCATTG ATCTGGAACA GTATGATGAG CTGGGCAGGC
GGTTGGTTCT TCCTTATGGC CGCCGAGATT TTTACGCTTG GCGCGCGCGA CTTTCGCCTG
CCCGGACTGG GCGCCTATTT GCAGACGGCT GCCAATGAAG AGAACCTGAC CGCCATTGGC
TACGGCATCG CCACGCTGGT CGTCGTCATT GTACTGCTCG ATCAACTGGT CTGGCGTCCA
TTGCTCGTCT GGGCGGATCG TTTCAAACTC GAAATGGTCG AGAGCGACAA TCCGCCGCAG
TCGTGGTTCT ACGATCTGGT GCAACGCGCT GCGCTGAACA ACGCAGTTGC CGGCGCAGTC
GCTCCGATAG GGCGCGTGTT CGATGCGTTG ATGGACCGCT TGCTGCCGCT GCCCCGTAGT
CTCAACGCCG AAACAAACCG TCGCTTCAGT GTTGGATGGC TGGTCTTTGC CGCCATTATC
GTAGCGGCGC TGGCGGGCGT GCTGTTTGGC GGGCGGTTGC TGCTCCAGGT TTCGCTTGAT
CAGTGGATCG ACATTGGCAT CGGGATCGGC GCGACGTTCC TGCGCGTTGT GGCAGCGCTG
ACAATTGCGC TGCTCTGGAC GGCGCCGCTT GGCGTCTATA TCGGCACGCA ACCGCGCGCG
GCGGCAGTGC TTCAGCCAAT CGTGCAGATC GTCGCTTCCA TTCCGGCAAC GGCGCTCTTC
CCGGTGCTGG TGCTGGCGCT GCTCGCCGTG CCCGGCGGGT TGAATGTTGC GGCGGTGCTG
CTCATGCTGC TCGGCACGCA GTGGTACCTG CTGTTCAATG TTATTGCCGG CGCTGCGGCC
ATTCCGCAGG ATTTACGCTA CACGACCGAC CTGTTGCAAC TGAGTGGTTG GCAGCGCTGG
CGCACGCTGA TCCTGCCGGC GCTCTTTCCG TACCTGATCA CCGGCATGAT CACCGCCAGC
GGAGGCGCCT GGAATGCCAG CATCGTCGCG GAATACGTCG TCTTTGGCGG GCAGGCGTAC
CAGAGTATTG GCGTCGGTGC GCAGATTACA TCCGCCACAG CCGACGGCGA CTACCCGCGC
CTCCTGGCGG CGACGCTGGC AATGGTTGTC ACGGTTGTGG CAATCAATCG CCTCGTCTGG
CGGCGTCTCT ATCGTCTGGC GGAAAACGTC TATCGCATGG AATGA
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| Protein sequence | MTAPTRRVFT PSPPDRPRFT VADGVILLII VGLLALGIWA AESAPAEVRG PEISLSISAL
PFYALHSVGR MAAAYVLSLV FTLIYGYVAA YNPRAERVLM PLLDVLQSVP ILSFLPIVLL
SLTAILPEGI AVELASIVLI FTSQVWNMTF AWYQSLTTVP RELREASAIF RFTRWRRLTV
LELPFGALAL IWNSMMSWAG GWFFLMAAEI FTLGARDFRL PGLGAYLQTA ANEENLTAIG
YGIATLVVVI VLLDQLVWRP LLVWADRFKL EMVESDNPPQ SWFYDLVQRA ALNNAVAGAV
APIGRVFDAL MDRLLPLPRS LNAETNRRFS VGWLVFAAII VAALAGVLFG GRLLLQVSLD
QWIDIGIGIG ATFLRVVAAL TIALLWTAPL GVYIGTQPRA AAVLQPIVQI VASIPATALF
PVLVLALLAV PGGLNVAAVL LMLLGTQWYL LFNVIAGAAA IPQDLRYTTD LLQLSGWQRW
RTLILPALFP YLITGMITAS GGAWNASIVA EYVVFGGQAY QSIGVGAQIT SATADGDYPR
LLAATLAMVV TVVAINRLVW RRLYRLAENV YRME
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