Gene Rcas_0161 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0161 
Symbol 
ID5537621 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp195890 
End bp196753 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content60% 
IMG OID640892325 
Producthypothetical protein 
Protein accessionYP_001430314 
Protein GI156740185 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAACTCT TCAACCGTCC TGACCGCACC AGACGTTTAC TGAATGCGTT TCGCACCAAT 
TTTCTGTTTC TGATCTCCGA TGGCGCATAT CCGCCGCATC GACAGCAGCG GCTGTACCGG
TGGTGTCAGA AAGTCGGGCT GGATTGGGCG CGCGCGCGGG CGCACGTCGC ACCGGAGGCA
ACCACATTTT TACAGAGCGT CATTCAGCGC AGCGTGAATG ATGGCGCCAT CGCGCCGGAG
GAAATGCAGA ACTTGCAGCG CCTGCGGCGG AGGCTTGGGC TGCCGGAGGA TGTGGAACCA
ATGACGCGGC TCTACGATCT GGTCGAGCGC AAGATTGAGC ATCTGCTGGT TGAGCGCGCC
GCTTATCTGA GTGAGGAGCA TGTCGTCCGG CGACTGACAG AGCAGATTGG CGCATATCAT
CTCCCGAAGG AGCGCGAGGA GCGTCTTCAG CGTCTGCTGC AACAGCAGCA CACGTATGCG
CGATTGATGG CTGGCAGGTT GCCGGTTCTT GCAGCCCCGA TCGACCTGCC GGATGGTGAA
GTGTGCCACG ATTACCGCGA GATTTCGTTT ATCGAAGCGA CCGCAGCCGC GCGCCACTCA
GGAGTCGGTT ATCTGGCGGT AACCTGCAAA CGGGTTATGG TGCTGTCGCC GCACGGCGGT
AGCGCAACGC GCTGGCACGA CATTCGTCAC GTGCAGTTGC AGAGCGACCG CGCCGTGCAG
ATCATCACGG CAACGACGAA CCTGCTCGTG TACTGTGACG AACCGCAGTA TGTCGCCACC
CTGATCATTG GCGCGCTGCG ACGGTACACG CAGCACATTC CCTCCTCACC ACCCTCGAAC
AAGCGCCTTG TTCCGAACGT GTGA
 
Protein sequence
MQLFNRPDRT RRLLNAFRTN FLFLISDGAY PPHRQQRLYR WCQKVGLDWA RARAHVAPEA 
TTFLQSVIQR SVNDGAIAPE EMQNLQRLRR RLGLPEDVEP MTRLYDLVER KIEHLLVERA
AYLSEEHVVR RLTEQIGAYH LPKEREERLQ RLLQQQHTYA RLMAGRLPVL AAPIDLPDGE
VCHDYREISF IEATAAARHS GVGYLAVTCK RVMVLSPHGG SATRWHDIRH VQLQSDRAVQ
IITATTNLLV YCDEPQYVAT LIIGALRRYT QHIPSSPPSN KRLVPNV