Gene Rcas_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0157 
Symbol 
ID5537617 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp190648 
End bp191688 
Gene Length1041 bp 
Protein Length346 aa 
Translation table11 
GC content60% 
IMG OID640892321 
Producthypothetical protein 
Protein accessionYP_001430310 
Protein GI156740181 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.050651 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones31 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCCGCTGC CCTTCTATCC AGCATGCCTG CCGTTGTCGC TTGGCGCCCT GCCGTATCGC 
AGCGCTGTAC AGGCGCTCGA TGTCGCGCGC CGGTATGCAG GAACGCTGCT TGCCTGGCCG
CAGTTGCCGC AGCGAAGTTT TCGTGAACAG TGTCTGGTGC AGAGCATCAT CGGCTTTCCT
GGTCTGGTGG TTGATGCTGC GGCGTTTCGG GTGTACGTTG ATCGTCGTGA AGCGGAACGT
CGGCTCGACG CGCTGTTGCT CGCGTACCTC GAACACACGA TCGACTACGC GGCGCTCAGC
GCCGATGACG CCGCCGGTCT CGCTGAAATA GTGCGCATTG GCGGAGGTCG TGATCTCCGC
GCAGTCAAGG GGCAGATTCT GGGACCGATC AGCGTGGCGC TGCAAATGAC CGATGAACAT
GAGCAACCGT TGATCTATGA TGATATGCTG TTCGATGCGA TCGCGCACAT GCTACGGTTG
CGCGTGGCAT GGCAGGAGTT GCGGTTGAGC GAGATCGCCC CGGCCACCAT CATGTGCATC
GATGAACCGC TGCTTGAAGC GGTGGCGTCG CCGTTCTTTC CGCACGATTG GGATCGTGTC
GCCGGGCAGA TCGACGATGT GCTGGCAGGG ATTAGCGGTT GTCGGGCGCT GTACACACGC
GGCAACGTCG ATCTTAATCA CCTGATGCAC ACATCGGTCG AGTTGTTGAT CGCCGAAAGC
GCCGTGTACC GACGCCTGTG CGCCTCGGGG TGCGATGAAT TGAGCGCGTT CCTCGAACGC
GGCGGCATGG TCGGTATTGG GATCATTCCT TCCGATGCCA ACCGCCTGGC GTCGGTGTCG
GTTGATTCGC TCTTCGAGGA ATTTGCCTCA TTATTGGATG ATTTCACATC ACAGGGCGTC
GCCCGCGATC GCATGCTGCA ACAGATGGTT ATATCGCCGG CGCAGTCGCT TGGCTATCTC
GATAGCGCCA GCGCCGAACG GGCCTTGTAT CTGCTTGCTG GCGTTTCCCA GCGGATTCGT
GAGGAATATG CATTGATCTG A
 
Protein sequence
MPLPFYPACL PLSLGALPYR SAVQALDVAR RYAGTLLAWP QLPQRSFREQ CLVQSIIGFP 
GLVVDAAAFR VYVDRREAER RLDALLLAYL EHTIDYAALS ADDAAGLAEI VRIGGGRDLR
AVKGQILGPI SVALQMTDEH EQPLIYDDML FDAIAHMLRL RVAWQELRLS EIAPATIMCI
DEPLLEAVAS PFFPHDWDRV AGQIDDVLAG ISGCRALYTR GNVDLNHLMH TSVELLIAES
AVYRRLCASG CDELSAFLER GGMVGIGIIP SDANRLASVS VDSLFEEFAS LLDDFTSQGV
ARDRMLQQMV ISPAQSLGYL DSASAERALY LLAGVSQRIR EEYALI