Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0157 |
Symbol | |
ID | 5537617 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 190648 |
End bp | 191688 |
Gene Length | 1041 bp |
Protein Length | 346 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892321 |
Product | hypothetical protein |
Protein accession | YP_001430310 |
Protein GI | 156740181 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.050651 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 31 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCCGCTGC CCTTCTATCC AGCATGCCTG CCGTTGTCGC TTGGCGCCCT GCCGTATCGC AGCGCTGTAC AGGCGCTCGA TGTCGCGCGC CGGTATGCAG GAACGCTGCT TGCCTGGCCG CAGTTGCCGC AGCGAAGTTT TCGTGAACAG TGTCTGGTGC AGAGCATCAT CGGCTTTCCT GGTCTGGTGG TTGATGCTGC GGCGTTTCGG GTGTACGTTG ATCGTCGTGA AGCGGAACGT CGGCTCGACG CGCTGTTGCT CGCGTACCTC GAACACACGA TCGACTACGC GGCGCTCAGC GCCGATGACG CCGCCGGTCT CGCTGAAATA GTGCGCATTG GCGGAGGTCG TGATCTCCGC GCAGTCAAGG GGCAGATTCT GGGACCGATC AGCGTGGCGC TGCAAATGAC CGATGAACAT GAGCAACCGT TGATCTATGA TGATATGCTG TTCGATGCGA TCGCGCACAT GCTACGGTTG CGCGTGGCAT GGCAGGAGTT GCGGTTGAGC GAGATCGCCC CGGCCACCAT CATGTGCATC GATGAACCGC TGCTTGAAGC GGTGGCGTCG CCGTTCTTTC CGCACGATTG GGATCGTGTC GCCGGGCAGA TCGACGATGT GCTGGCAGGG ATTAGCGGTT GTCGGGCGCT GTACACACGC GGCAACGTCG ATCTTAATCA CCTGATGCAC ACATCGGTCG AGTTGTTGAT CGCCGAAAGC GCCGTGTACC GACGCCTGTG CGCCTCGGGG TGCGATGAAT TGAGCGCGTT CCTCGAACGC GGCGGCATGG TCGGTATTGG GATCATTCCT TCCGATGCCA ACCGCCTGGC GTCGGTGTCG GTTGATTCGC TCTTCGAGGA ATTTGCCTCA TTATTGGATG ATTTCACATC ACAGGGCGTC GCCCGCGATC GCATGCTGCA ACAGATGGTT ATATCGCCGG CGCAGTCGCT TGGCTATCTC GATAGCGCCA GCGCCGAACG GGCCTTGTAT CTGCTTGCTG GCGTTTCCCA GCGGATTCGT GAGGAATATG CATTGATCTG A
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Protein sequence | MPLPFYPACL PLSLGALPYR SAVQALDVAR RYAGTLLAWP QLPQRSFREQ CLVQSIIGFP GLVVDAAAFR VYVDRREAER RLDALLLAYL EHTIDYAALS ADDAAGLAEI VRIGGGRDLR AVKGQILGPI SVALQMTDEH EQPLIYDDML FDAIAHMLRL RVAWQELRLS EIAPATIMCI DEPLLEAVAS PFFPHDWDRV AGQIDDVLAG ISGCRALYTR GNVDLNHLMH TSVELLIAES AVYRRLCASG CDELSAFLER GGMVGIGIIP SDANRLASVS VDSLFEEFAS LLDDFTSQGV ARDRMLQQMV ISPAQSLGYL DSASAERALY LLAGVSQRIR EEYALI
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