| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0155 |
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| Symbol | |
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| ID | 5537615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 186391 |
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| End bp | 189435 |
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| Gene Length | 3045 bp |
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| Protein Length | 1014 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892319 |
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| Product | multi-sensor signal transduction histidine kinase |
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| Protein accession | YP_001430308 |
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| Protein GI | 156740179 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG2203] FOG: GAF domain
[COG2205] Osmosensitive K+ channel histidine kinase |
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| TIGRFAM ID | [TIGR00229] PAS domain S-box |
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Plasmid Coverage information |
| Num covering plasmid clones | 7 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 32 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAACGCA CGCCTGCACT CGATATCAAT AGTGTTGACA TCATGCACCG CCTCAGCTCC
GATCTGTCGC TGGCAACCAG CCTCAATGCA GGCGTCACAT GTGTTGTCAC TGCGATCGAG
CGCGTCTTCG CGCCACGCGA TTGCCAGGTT GTGGCGCTGA TGGCGGGTGA GCCGAGTTTG
CTGCATAGCG TTGGCGCCGT GCGGTTGCCC GATGAACAGT GCCTGACTGC GTTGCGCGCC
GGGGAAGTCG TCGTGCCAGG ACAGGACCAG AGCCTGATTT TTGCTCCGCT GCGCGCGCGA
CGCACCCTGA TAGGCTGGGT ATGCCTGATC GATCCCGTCT GGTCGCCCGA TCTGGCGCCG
CTGCTGGAAC TGATTGCCGC ACAGGCAGGT CCTGCACTGG CGTTGTTGGG TAACTTTGGG
CGGCGGGATG ATCAGGCAGC GCAGTTGCAA ACATTGAATG AGATCGGACA ATTACTCGGC
GGTGCGTTTG ATCGAACCCA ACTGTTTGCT GTCATCCACA CGGCGGTCCA GCGCATCGTC
GAAGCGCCAA CCTTCTTGAT TGCGTTATAC GATGGGTACA CCGGGGAATT GGAGCCAGTC
TACCTGATGC ACGACGGGCA ACGACGTCCT CCCGGAGAAC GATGGTCGAT CAACGTTGGG
CTTGCCGGGG TGGTCATCAG GGAACGAAAG CCGTTGTGTG TCAGCAACTA TGCGGAAGCG
TGCGCGCAGC GCGGCATTCA GCCACGGATG ATCGAGGGCC GCATATTGGG TCCAGCCTGG
CTTGGTGTGC CGCTCATTGC CGATGAGCGT TTGATTGGCG TCATTGTGCT GGCAAGCTCG
CGCGAAGGGT ATGTATATCG CCAGGAACAC GTCAATCTGC TCATGACCAT TGCGACGCAC
GCGGCTGTCG CGCTCGACCG CGCCCAACTC CATGAACGCA CCGAGCGCCA GGCGCAGCAG
TTGATGGTGC TGAACCGCAT CGGGCGCATC ATTACGTCAT CTATCGATCC GCAACAGGTG
CCGGGTATTA TCCTGCGTCA GGTGACGGAG TTGCTGAACG TGGAGGAGAG TTCACTGCTG
CTCACCGACG AGGCTACGGG CGAAATGGTG TTCGCCTATA CGACCGGGCA GGTCGGGCAA
CGAATCTTAG GTCAACGCCT GCCGCGTGGC GTTGGCATCG CCGGGTATGT TATTACGACC
GGGCAATCGG TGATCGTCAA CGATGTGCAG TCCGATACGC GCTTCTACCG TTCGCTGGAC
CTTTCGACCG GATTTACAAC CCGCGCCTTA CTGGCGGTGC CGCTGCGCGG CGTTGGGGGG
GTGGAAGGAG TCATCGAGGT GATCAACCGA CGCGATCGGC GTCCGTTCAC CCTCGAAGAT
CAACAACTCC TCGAAGCGTT GGCGGATTAT GCCGTCATCG CGCTGGAAAA CGCGCGCCAG
TTTCAGAAAA TCGATCAGGC GCTGGCGCGA CGCGCACAGG AACTGGCGCG TACCAACGAG
CAACTTGAAC AGAACCTCCG CAGCCTGACG GCGCTCAATG CGTTCGGCAT GGCGATCAAC
ACGACGCTGC GCAGTCCGCA CGAAATCTTA AGCATGACGG CGCGCGGGAT CGCAGAAATG
ACCGGTGCGC TTGGTGCGAT GGTGCTGCTG CCGGAAGACC AAGGAGTTCG GTCTGTCGTG
TCGATTGGGC TGCGCATCGC AATGGATGAG CGTTTGCTGA AGGCGGTGCA TCACGTCATG
ACTATCGGTC GTCCTGAAAC GCTGGCGCCC GATCCGGACG CTCCGATGCG TTCGCCTCGC
TGCACGATCT TTATCGTGCC GCTGCGCGCC ACGCAACGCA CGCTTGGGTG TGTGTGCGTT
GCCTATGCGA ATGCCCCGCC GGAGCCGTCT GATCAGGAAA CGGTCGTCTT GTTTGCATCG
CAGGCGGCAG TCGCTATCGA AAGCATTGAT CTCTTCGTGG CGGTGCGCAC GGCGCGCGAT
CAGATGGCGT CGATCCTGGC ATCGACGCGT GAAGGCATTC TGTTGATCAG CGCCGATGGC
ACGGTCGCTA TTGCCAATGC GGCGCTCTCC GAGTTGACGG CGCTCGATGC CGGTCGATTC
CAGGGTATGC CGATCGATGC ATTTCTGGCG CGCTGGTTCG AGTCCGCAGC CTATGCAACC
GAAGAGTGCG CGGCATTGCA GCGCGCGATC GACGATGCGT TGAGTGGCGC CGCTCAATTC
ATTGCCGGCG AACTGAGCGG AAGCGCCGGC AGGTTCCTCT ATCTGGAATG GTCGGTGCTC
CGGGCGCAGA GCAGCGGCGA TAGTCATGGC GGTGTGCTGC TCGTTGTGCG GGACATCACT
GCGGCGCGCG AGGCGGATCG TATGCGGCAG GATTTGATGC ATATGATTGT TCACGACCTG
CGCAGCCCGC TTTCCAGTGT GATGGCGTCG CTTGAGTTGA TGATGCGTGG TGTGCCAGGC
GCGTTAAGTG ATCAGCAATT GCATGTGTTG CAGATCGCCA ATACCAGCGC GACGAGCATG
CTGGAGATGA TCAACACCCT GCTCGACATC AGTCGCCTCG AAGCCGGACG TATGCCGATC
GAACGCTGTC GCGGAGATAT TCGAAGCATT ATCGTCGATG CAGTGCGACG CTTGTCGTCG
CTGGCGCTGG ATCGCGCCAT CTCGGTTGAG ATCGGGGTCG ATAGCGACAT CCCACACATC
TATGCCGATG TCGGGCTTGT GGGGCGCGTG CTTCAAAATC TGGTCAGTAA TGCGATCAAG
TTCAGCAATC GTGGCGGACT GGTGCGGGTG CAGGCTGCTG TGCGTCCAGA GGATGGGCAG
GAGAAAGTTC TTGTGACTGT CAGCGATCAG GGGGTGGGCA TTGCGCCTGG TGATCGCGAG
CGGATCTTCG CTAAGTTCAG CCAGGTCGGT GAGCGGCGCG GCGGCACCGG GTTGGGGCTG
GCTTTCTGCA AACAGGCAAT CGAAGCGCAC GGCGAGCGCA TCTGGGTCGA GAGCGAACTC
GGGCGCGGTT CGACATTCTT TTTCACGCTC CCGCTTGCGT CCTGA
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| Protein sequence | MERTPALDIN SVDIMHRLSS DLSLATSLNA GVTCVVTAIE RVFAPRDCQV VALMAGEPSL
LHSVGAVRLP DEQCLTALRA GEVVVPGQDQ SLIFAPLRAR RTLIGWVCLI DPVWSPDLAP
LLELIAAQAG PALALLGNFG RRDDQAAQLQ TLNEIGQLLG GAFDRTQLFA VIHTAVQRIV
EAPTFLIALY DGYTGELEPV YLMHDGQRRP PGERWSINVG LAGVVIRERK PLCVSNYAEA
CAQRGIQPRM IEGRILGPAW LGVPLIADER LIGVIVLASS REGYVYRQEH VNLLMTIATH
AAVALDRAQL HERTERQAQQ LMVLNRIGRI ITSSIDPQQV PGIILRQVTE LLNVEESSLL
LTDEATGEMV FAYTTGQVGQ RILGQRLPRG VGIAGYVITT GQSVIVNDVQ SDTRFYRSLD
LSTGFTTRAL LAVPLRGVGG VEGVIEVINR RDRRPFTLED QQLLEALADY AVIALENARQ
FQKIDQALAR RAQELARTNE QLEQNLRSLT ALNAFGMAIN TTLRSPHEIL SMTARGIAEM
TGALGAMVLL PEDQGVRSVV SIGLRIAMDE RLLKAVHHVM TIGRPETLAP DPDAPMRSPR
CTIFIVPLRA TQRTLGCVCV AYANAPPEPS DQETVVLFAS QAAVAIESID LFVAVRTARD
QMASILASTR EGILLISADG TVAIANAALS ELTALDAGRF QGMPIDAFLA RWFESAAYAT
EECAALQRAI DDALSGAAQF IAGELSGSAG RFLYLEWSVL RAQSSGDSHG GVLLVVRDIT
AAREADRMRQ DLMHMIVHDL RSPLSSVMAS LELMMRGVPG ALSDQQLHVL QIANTSATSM
LEMINTLLDI SRLEAGRMPI ERCRGDIRSI IVDAVRRLSS LALDRAISVE IGVDSDIPHI
YADVGLVGRV LQNLVSNAIK FSNRGGLVRV QAAVRPEDGQ EKVLVTVSDQ GVGIAPGDRE
RIFAKFSQVG ERRGGTGLGL AFCKQAIEAH GERIWVESEL GRGSTFFFTL PLAS
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