Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0154 |
Symbol | |
ID | 5537614 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 185176 |
End bp | 186381 |
Gene Length | 1206 bp |
Protein Length | 401 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892318 |
Product | hypothetical protein |
Protein accession | YP_001430307 |
Protein GI | 156740178 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 32 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAACGGA TCATCACGCT CCTTCTCACA CTCATCGTGC TGTTGCTCCT CTCGTCGTGC GCCGCGCGTC CGCTCCTTGG CGATGTGACA CTGTCGGCAA ACGAACTACG CCCGACGGGG GCTGGCGAGA CGGTGACGAT TACGTATGCC ATTGGTCGCC CGGCGCGAGT GACGGTGGCG CTGGTCGATG ACGGCGGAAC GCGCTATACG CTTCGTCGTG ACGAACCGCG CGCTCCCTCC ACCGAACCGT ATGCGCTGCG CTTCGATGGC ACGGCGCCGA CTGACGATCC GGCGCTGCTA CGGCGGATGC TCCCCGGCGG CGCCTATAAA GTTGTTGTCG AGGCGGTCGG CGACGATGGA GCGCGTCAGA CGGCGGAGCA ACCACTGACC ATCATTGGGC AGGACGCGCC GTTGCCGCTG ATCGAAAACC TGGTTATTTA TCCTGACACG ATTTCGCCCA ATGCCGACGC AATTGATGAT GTGGCTGAGA TCACTTATCA ATTGCCAACA ACAGCGACGG TAGACATCGT GGTAGCAGCG CAGGATGGTG CGACATTTCC GTTCGTCACG GCTGCCGAAG AAGAACCCGC GTTGCAGAAG CATGTCTGGA ATGGGCGCAC CGTTGACGGC GCTCTGCTTC CCGATGGCGT GTACACCCTG ATCATCCGGG CACAGGATCG GTTTGGCAAC CTGGTCGAAC AGCGCCGGTC GATCACGATT GAAGGCGGCG GGCAGCCAGA AGCGCTCATC ACCTATAGTT ACATGGCGCC GCAGTCGGTG ATGCTTGGCG AGGTGATCAC CGTCACCGTG CGTGTCCGCA ACACCGGCAT CGTGCCGATC CGCACCTATG GACCGCCATC GGGGTACGAG TACGACACCG ATCAGGTCTT TTCGTCAATC GCAGATGGCG CATATGTTGC GCGATCCGGT GGGTTCTGGC GAATTGGCGT CGATTGGGAC GCCAACAGCG GCGGCGCTGC CAAACGCTAC CCTTACCGCT GGGCAATTTC GCCGCGACCG CCAGAGCAGT GGCGTGTTCC CTTTGAGGAA GACCTGCTGA TGCCAGGTGA AGAAGCGGAG ATCGTCGGGC GTATACGGAT TCGTCAACCA GAGACGAAGA TGGGATTTTA TGTCGGATTG ATCCAGGACG GCGTAGGGTT TTTCCAGGAT CGCACCGGTC GCACCATCAT CAAGGTCGGG TTTTGA
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Protein sequence | MKRIITLLLT LIVLLLLSSC AARPLLGDVT LSANELRPTG AGETVTITYA IGRPARVTVA LVDDGGTRYT LRRDEPRAPS TEPYALRFDG TAPTDDPALL RRMLPGGAYK VVVEAVGDDG ARQTAEQPLT IIGQDAPLPL IENLVIYPDT ISPNADAIDD VAEITYQLPT TATVDIVVAA QDGATFPFVT AAEEEPALQK HVWNGRTVDG ALLPDGVYTL IIRAQDRFGN LVEQRRSITI EGGGQPEALI TYSYMAPQSV MLGEVITVTV RVRNTGIVPI RTYGPPSGYE YDTDQVFSSI ADGAYVARSG GFWRIGVDWD ANSGGAAKRY PYRWAISPRP PEQWRVPFEE DLLMPGEEAE IVGRIRIRQP ETKMGFYVGL IQDGVGFFQD RTGRTIIKVG F
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