Gene Rcas_0154 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0154 
Symbol 
ID5537614 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp185176 
End bp186381 
Gene Length1206 bp 
Protein Length401 aa 
Translation table11 
GC content60% 
IMG OID640892318 
Producthypothetical protein 
Protein accessionYP_001430307 
Protein GI156740178 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones32 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGGA TCATCACGCT CCTTCTCACA CTCATCGTGC TGTTGCTCCT CTCGTCGTGC 
GCCGCGCGTC CGCTCCTTGG CGATGTGACA CTGTCGGCAA ACGAACTACG CCCGACGGGG
GCTGGCGAGA CGGTGACGAT TACGTATGCC ATTGGTCGCC CGGCGCGAGT GACGGTGGCG
CTGGTCGATG ACGGCGGAAC GCGCTATACG CTTCGTCGTG ACGAACCGCG CGCTCCCTCC
ACCGAACCGT ATGCGCTGCG CTTCGATGGC ACGGCGCCGA CTGACGATCC GGCGCTGCTA
CGGCGGATGC TCCCCGGCGG CGCCTATAAA GTTGTTGTCG AGGCGGTCGG CGACGATGGA
GCGCGTCAGA CGGCGGAGCA ACCACTGACC ATCATTGGGC AGGACGCGCC GTTGCCGCTG
ATCGAAAACC TGGTTATTTA TCCTGACACG ATTTCGCCCA ATGCCGACGC AATTGATGAT
GTGGCTGAGA TCACTTATCA ATTGCCAACA ACAGCGACGG TAGACATCGT GGTAGCAGCG
CAGGATGGTG CGACATTTCC GTTCGTCACG GCTGCCGAAG AAGAACCCGC GTTGCAGAAG
CATGTCTGGA ATGGGCGCAC CGTTGACGGC GCTCTGCTTC CCGATGGCGT GTACACCCTG
ATCATCCGGG CACAGGATCG GTTTGGCAAC CTGGTCGAAC AGCGCCGGTC GATCACGATT
GAAGGCGGCG GGCAGCCAGA AGCGCTCATC ACCTATAGTT ACATGGCGCC GCAGTCGGTG
ATGCTTGGCG AGGTGATCAC CGTCACCGTG CGTGTCCGCA ACACCGGCAT CGTGCCGATC
CGCACCTATG GACCGCCATC GGGGTACGAG TACGACACCG ATCAGGTCTT TTCGTCAATC
GCAGATGGCG CATATGTTGC GCGATCCGGT GGGTTCTGGC GAATTGGCGT CGATTGGGAC
GCCAACAGCG GCGGCGCTGC CAAACGCTAC CCTTACCGCT GGGCAATTTC GCCGCGACCG
CCAGAGCAGT GGCGTGTTCC CTTTGAGGAA GACCTGCTGA TGCCAGGTGA AGAAGCGGAG
ATCGTCGGGC GTATACGGAT TCGTCAACCA GAGACGAAGA TGGGATTTTA TGTCGGATTG
ATCCAGGACG GCGTAGGGTT TTTCCAGGAT CGCACCGGTC GCACCATCAT CAAGGTCGGG
TTTTGA
 
Protein sequence
MKRIITLLLT LIVLLLLSSC AARPLLGDVT LSANELRPTG AGETVTITYA IGRPARVTVA 
LVDDGGTRYT LRRDEPRAPS TEPYALRFDG TAPTDDPALL RRMLPGGAYK VVVEAVGDDG
ARQTAEQPLT IIGQDAPLPL IENLVIYPDT ISPNADAIDD VAEITYQLPT TATVDIVVAA
QDGATFPFVT AAEEEPALQK HVWNGRTVDG ALLPDGVYTL IIRAQDRFGN LVEQRRSITI
EGGGQPEALI TYSYMAPQSV MLGEVITVTV RVRNTGIVPI RTYGPPSGYE YDTDQVFSSI
ADGAYVARSG GFWRIGVDWD ANSGGAAKRY PYRWAISPRP PEQWRVPFEE DLLMPGEEAE
IVGRIRIRQP ETKMGFYVGL IQDGVGFFQD RTGRTIIKVG F