Gene Rcas_0152 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0152 
Symbol 
ID5537612 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp183619 
End bp184023 
Gene Length405 bp 
Protein Length134 aa 
Translation table11 
GC content58% 
IMG OID640892316 
Productglyoxalase/bleomycin resistance protein/dioxygenase 
Protein accessionYP_001430305 
Protein GI156740176 
COG category[E] Amino acid transport and metabolism
[R] General function prediction only 
COG ID[COG3185] 4-hydroxyphenylpyruvate dioxygenase and related hemolysins 
TIGRFAM ID[TIGR03081] methylmalonyl-CoA epimerase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones33 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTTGAGA AGGTCGATCA TATCGGTTTC GCCGTGCGCG ACATCGACAG CGCTATCGCT 
TTCTACAGCC AGACGTTCGG GATCGGTGAG TGGGAACGTA TCCCAATGCC GGAGCGCCAC
ATGGAAGTTG CGGCAACGCG CATGGGCGAT ATGCTGCTCG AACTGATTGC GCCAACATCG
GATGAAGCGG CGTTTGCGAA ATATTTGAAC GAACGTGGTC CCGGCATGCA CCACATCGCC
TACAGAGTGA ACGATATCGT CGCTGCTCTG GCAGAGATCA AGGCGCGCGG CGTTCAACTG
ATCGACGAAA CGCCGCGCCC TGGTCTGCAC GATACGCTGG TCGCCTTCCT TCATCCCAAG
AGTTGCCAGG GCGTGCTGGT CGAACTGGTG CAGCATCGCC ATTGA
 
Protein sequence
MFEKVDHIGF AVRDIDSAIA FYSQTFGIGE WERIPMPERH MEVAATRMGD MLLELIAPTS 
DEAAFAKYLN ERGPGMHHIA YRVNDIVAAL AEIKARGVQL IDETPRPGLH DTLVAFLHPK
SCQGVLVELV QHRH