Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0144 |
Symbol | |
ID | 5537604 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 173212 |
End bp | 174078 |
Gene Length | 867 bp |
Protein Length | 288 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640892308 |
Product | hypothetical protein |
Protein accession | YP_001430297 |
Protein GI | 156740168 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAACCTTG TTCAGTTTAT TAACCAGATA CTCGGTCTAT TTGGTGTAAA AATCATCTCT ACCATACCAG AGAAGCGTGA ATCTCAGCGT CTGGACGAAT TACGGCGACG TAACCACTGG TCGACGGCAA AATACACTGC TGGCCTGGAT CTGGATGAAA CACGATTTCT CTGGTTTCTC GATCATGTTT GTGTGCCGTA CCGGGATGAT TTTAATCTTC TATTATGCGA TGCTGCAAAA ATCTGCCATG GATATCGAAT CGATAATATC TGGTTTGGTC CAATTGATAG CTGCGTACTC TACGGGATTA TTCGCCATTT TCGTCCAAAT CACATTATTG AGGTTGGTAG CGGTTTTTCG ACGCATCTGA TGCGTTGTGC TATTGTCGAT GGCAACCTAC CCACCAGGAT CATCAGTATC GATCCAGAAC CTCGGGTTGA TATTCATCAA GTCGCCGACA CAATTCTTGC TCGGAGAGTA GAAGAACTCG ATGTTCATAA TATCGTCGAT CAATTGAATA CAGGCGATAT TTTATTCATC GACTCAAGCC ATACAATTGT CAGCGGTGGC GATGCTCCTT TTCTCTTTCT TGAAGTTCTT CCGAACCTGC GACCTGGTGT GTTGATTCAC GTTCATGATA CATTCTTCCC TTATGATTAT CCAGAAGAGT GGATTTGCAC CCTTCGCAGA GGATGGAACG AACAATACCT CGTTCATGCG TTTCTGGCAT TCAATACCAC CTTTCGCATC CTCTGGTCAG GATCATATAT GTGGGACAGG CAGCGCGAAG CGTTGATCGC TGCTCTGCCA CATAGCGCGA ACGCAAAGGG CGCCGGGAGT TTATGGTTGC AGCGCATTGA TTCGTAA
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Protein sequence | MNLVQFINQI LGLFGVKIIS TIPEKRESQR LDELRRRNHW STAKYTAGLD LDETRFLWFL DHVCVPYRDD FNLLLCDAAK ICHGYRIDNI WFGPIDSCVL YGIIRHFRPN HIIEVGSGFS THLMRCAIVD GNLPTRIISI DPEPRVDIHQ VADTILARRV EELDVHNIVD QLNTGDILFI DSSHTIVSGG DAPFLFLEVL PNLRPGVLIH VHDTFFPYDY PEEWICTLRR GWNEQYLVHA FLAFNTTFRI LWSGSYMWDR QREALIAALP HSANAKGAGS LWLQRIDS
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