Gene Rcas_0144 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0144 
Symbol 
ID5537604 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp173212 
End bp174078 
Gene Length867 bp 
Protein Length288 aa 
Translation table11 
GC content46% 
IMG OID640892308 
Producthypothetical protein 
Protein accessionYP_001430297 
Protein GI156740168 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones25 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCTTG TTCAGTTTAT TAACCAGATA CTCGGTCTAT TTGGTGTAAA AATCATCTCT 
ACCATACCAG AGAAGCGTGA ATCTCAGCGT CTGGACGAAT TACGGCGACG TAACCACTGG
TCGACGGCAA AATACACTGC TGGCCTGGAT CTGGATGAAA CACGATTTCT CTGGTTTCTC
GATCATGTTT GTGTGCCGTA CCGGGATGAT TTTAATCTTC TATTATGCGA TGCTGCAAAA
ATCTGCCATG GATATCGAAT CGATAATATC TGGTTTGGTC CAATTGATAG CTGCGTACTC
TACGGGATTA TTCGCCATTT TCGTCCAAAT CACATTATTG AGGTTGGTAG CGGTTTTTCG
ACGCATCTGA TGCGTTGTGC TATTGTCGAT GGCAACCTAC CCACCAGGAT CATCAGTATC
GATCCAGAAC CTCGGGTTGA TATTCATCAA GTCGCCGACA CAATTCTTGC TCGGAGAGTA
GAAGAACTCG ATGTTCATAA TATCGTCGAT CAATTGAATA CAGGCGATAT TTTATTCATC
GACTCAAGCC ATACAATTGT CAGCGGTGGC GATGCTCCTT TTCTCTTTCT TGAAGTTCTT
CCGAACCTGC GACCTGGTGT GTTGATTCAC GTTCATGATA CATTCTTCCC TTATGATTAT
CCAGAAGAGT GGATTTGCAC CCTTCGCAGA GGATGGAACG AACAATACCT CGTTCATGCG
TTTCTGGCAT TCAATACCAC CTTTCGCATC CTCTGGTCAG GATCATATAT GTGGGACAGG
CAGCGCGAAG CGTTGATCGC TGCTCTGCCA CATAGCGCGA ACGCAAAGGG CGCCGGGAGT
TTATGGTTGC AGCGCATTGA TTCGTAA
 
Protein sequence
MNLVQFINQI LGLFGVKIIS TIPEKRESQR LDELRRRNHW STAKYTAGLD LDETRFLWFL 
DHVCVPYRDD FNLLLCDAAK ICHGYRIDNI WFGPIDSCVL YGIIRHFRPN HIIEVGSGFS
THLMRCAIVD GNLPTRIISI DPEPRVDIHQ VADTILARRV EELDVHNIVD QLNTGDILFI
DSSHTIVSGG DAPFLFLEVL PNLRPGVLIH VHDTFFPYDY PEEWICTLRR GWNEQYLVHA
FLAFNTTFRI LWSGSYMWDR QREALIAALP HSANAKGAGS LWLQRIDS