Gene Rcas_0141 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0141 
Symbol 
ID5537601 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp169771 
End bp170454 
Gene Length684 bp 
Protein Length227 aa 
Translation table11 
GC content57% 
IMG OID640892305 
Productmethyltransferase type 11 
Protein accessionYP_001430294 
Protein GI156740165 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCGAAA TTATCAAAGA GTTCGTGAGC GAGTGTGCGG CTGTGTTGCC AATTTGTGAA 
CCAATTCACG AATTTGGCGC GTATCAGGTC GCTGGACAGG AAGGGTTCGC CGATCTCCGC
TCGATCTTTT CAAGTCAATG CTACATCGGG TCCGATATGC GCTACGGTCC AGGCGTGGAC
GTCCTGCTGG ATCTCCACGC TCTTGGTCTT GCAGATGCGA GCGTCGGCAG CGCACTGATC
CTCGACACTC TCGAACACGT CGAGAAGCCC TGGCGCGCGA TGGAAGAGGT GCACCGCATC
TTGAAGCCAG GCGGTATCGT GCTCATATCA TCAGTGATGA ACTTTCCGAT CCATAACCAC
CCATCAGATT ATTGGCGATT CACGCCAGAA GCGTTTCACA GCATGCTGCA TCCGTTTGAG
TATGCTCTGG TGATGTGGGC AGGCGTCGAA GATTTCCCAG AAACCGTGGT AGGGGTTGGT
TGCAAAGGTC GGTTGGCTGA AGCGCAGGCG CGTGCGTTGC AGGAACGTCT GACAGCGTGG
CAAGCGCGCT GGGCGCCACG TGTTCCGCCT TTGTATGAAC GGATTGCCAA ACTCGTTGCG
CCGCCTATCG CGCTCAGCGC CTATCGCGCG CTGCGCGATC ACGACCTGCA CTGGATTCGT
CAGGCATGGC ATCAACCAGG TTGA
 
Protein sequence
MREIIKEFVS ECAAVLPICE PIHEFGAYQV AGQEGFADLR SIFSSQCYIG SDMRYGPGVD 
VLLDLHALGL ADASVGSALI LDTLEHVEKP WRAMEEVHRI LKPGGIVLIS SVMNFPIHNH
PSDYWRFTPE AFHSMLHPFE YALVMWAGVE DFPETVVGVG CKGRLAEAQA RALQERLTAW
QARWAPRVPP LYERIAKLVA PPIALSAYRA LRDHDLHWIR QAWHQPG