Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0137 |
Symbol | |
ID | 5537597 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 166012 |
End bp | 166902 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 640892301 |
Product | glycosyl transferase family protein |
Protein accession | YP_001430290 |
Protein GI | 156740161 |
COG category | [R] General function prediction only |
COG ID | [COG1216] Predicted glycosyltransferases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.145337 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGCGGCGAT CTGGTTATAC TCACGGCACT GTGAACGCTG GCATATCGGT GATTATTCCC AACCTGCATT CGCCATTGAT CGGCGAGGTA ATCGATGCCA TTACCCATCA GACCGAACAG CGCCTGATTG GTGAAATCAT CGTGGTCGGA CAGGATTGCC ACCGACTGGT CAAGCCGCCG GCGCGCCATG TCGAAACGTC TCATCCGGTC TCAGCCGCGC GCGCGCGCAA TCTGGGCGCG GCGCTTGCGC GAGGCGATCA TCTGCTCTTC ATCGACTCCG ACTGCATTGC CGCGCCCGAT CTGGTCGAAC GAATTGTTGC GCGATTGCAT AAGGGCGATA TAGTTGTTTG CGGCGGGGTT GTGATTGAAA CCGGCGAGTA CTGGAGCGAC TGTGACAATT TATTAGTTTT CGCCGACTAT CTTGCTACAG CGCCTGCGGG AGAACGCATG TGGGCGCCGA GCCTGAACCT GTGCATTCGA CGATCCGTCT TCTGGAGCAT TGGCGGTTTT GATGAACGCT TCCCCAGCGC AGCCGGCGAG GACACCGATT TGAGTCTGCG ATTGCGCGCG AGCGGCATCA GAATCGCCTT TGAGCCGCGC GCGCGCGTAA TCCATCATCA CCGACGCGCG ACACCGCGCG CCGTGTGGGA GCATCTTCGG GCATTCGGGC GAGTGCAGGC GACGATCTGG CGTCGCCATG CCCGGTTGAT GCCGCCGCCG CTGCCACTCG AACGGCTGCG GGCGCTTGCC CCGGCGCTGC GGGCTGTCGC GCCATTTCTG GCAATCCGCG ACACTGCAAC CCTGGCGCAC CACGCGCCGC ACCTGCTGCC GGGGCTGGTC TGGGCGCGCA CCGCATGGTA CTGGGGAGTG GCGGAGGGAG TGGGAGGGTA G
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Protein sequence | MRRSGYTHGT VNAGISVIIP NLHSPLIGEV IDAITHQTEQ RLIGEIIVVG QDCHRLVKPP ARHVETSHPV SAARARNLGA ALARGDHLLF IDSDCIAAPD LVERIVARLH KGDIVVCGGV VIETGEYWSD CDNLLVFADY LATAPAGERM WAPSLNLCIR RSVFWSIGGF DERFPSAAGE DTDLSLRLRA SGIRIAFEPR ARVIHHHRRA TPRAVWEHLR AFGRVQATIW RRHARLMPPP LPLERLRALA PALRAVAPFL AIRDTATLAH HAPHLLPGLV WARTAWYWGV AEGVGG
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