Gene Rcas_0137 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0137 
Symbol 
ID5537597 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp166012 
End bp166902 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content63% 
IMG OID640892301 
Productglycosyl transferase family protein 
Protein accessionYP_001430290 
Protein GI156740161 
COG category[R] General function prediction only 
COG ID[COG1216] Predicted glycosyltransferases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.145337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGCGGCGAT CTGGTTATAC TCACGGCACT GTGAACGCTG GCATATCGGT GATTATTCCC 
AACCTGCATT CGCCATTGAT CGGCGAGGTA ATCGATGCCA TTACCCATCA GACCGAACAG
CGCCTGATTG GTGAAATCAT CGTGGTCGGA CAGGATTGCC ACCGACTGGT CAAGCCGCCG
GCGCGCCATG TCGAAACGTC TCATCCGGTC TCAGCCGCGC GCGCGCGCAA TCTGGGCGCG
GCGCTTGCGC GAGGCGATCA TCTGCTCTTC ATCGACTCCG ACTGCATTGC CGCGCCCGAT
CTGGTCGAAC GAATTGTTGC GCGATTGCAT AAGGGCGATA TAGTTGTTTG CGGCGGGGTT
GTGATTGAAA CCGGCGAGTA CTGGAGCGAC TGTGACAATT TATTAGTTTT CGCCGACTAT
CTTGCTACAG CGCCTGCGGG AGAACGCATG TGGGCGCCGA GCCTGAACCT GTGCATTCGA
CGATCCGTCT TCTGGAGCAT TGGCGGTTTT GATGAACGCT TCCCCAGCGC AGCCGGCGAG
GACACCGATT TGAGTCTGCG ATTGCGCGCG AGCGGCATCA GAATCGCCTT TGAGCCGCGC
GCGCGCGTAA TCCATCATCA CCGACGCGCG ACACCGCGCG CCGTGTGGGA GCATCTTCGG
GCATTCGGGC GAGTGCAGGC GACGATCTGG CGTCGCCATG CCCGGTTGAT GCCGCCGCCG
CTGCCACTCG AACGGCTGCG GGCGCTTGCC CCGGCGCTGC GGGCTGTCGC GCCATTTCTG
GCAATCCGCG ACACTGCAAC CCTGGCGCAC CACGCGCCGC ACCTGCTGCC GGGGCTGGTC
TGGGCGCGCA CCGCATGGTA CTGGGGAGTG GCGGAGGGAG TGGGAGGGTA G
 
Protein sequence
MRRSGYTHGT VNAGISVIIP NLHSPLIGEV IDAITHQTEQ RLIGEIIVVG QDCHRLVKPP 
ARHVETSHPV SAARARNLGA ALARGDHLLF IDSDCIAAPD LVERIVARLH KGDIVVCGGV
VIETGEYWSD CDNLLVFADY LATAPAGERM WAPSLNLCIR RSVFWSIGGF DERFPSAAGE
DTDLSLRLRA SGIRIAFEPR ARVIHHHRRA TPRAVWEHLR AFGRVQATIW RRHARLMPPP
LPLERLRALA PALRAVAPFL AIRDTATLAH HAPHLLPGLV WARTAWYWGV AEGVGG