| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0121 |
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| Symbol | |
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| ID | 5537581 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 143241 |
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| End bp | 144605 |
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| Gene Length | 1365 bp |
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| Protein Length | 454 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892286 |
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| Product | histidyl-tRNA synthetase |
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| Protein accession | YP_001430275 |
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| Protein GI | 156740146 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0124] Histidyl-tRNA synthetase |
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| TIGRFAM ID | [TIGR00442] histidyl-tRNA synthetase |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCCAGCC GGGTTCAGAA CATTCGAGGC ATGCGCGATC ACCTGCCATC CGCCATGATC
CTGCGGCAGC ACATTATTAA CACGCTGACT TCCGTTTTTG AGCGTTATGG TTTTGAGCCG
TTGCAGACGC CAATTGTCGA ATATGCCGAA ACGCTCGACG GCAAAATCGG CGATGATGAG
AAGTTGATCT ATCGTTTCGA GGATCACGGC GGGCGGAAGG TGGCGTTGCG CTACGATCAG
ACGGTGCCGC TGGCACGGGT TGTCGCGCAG TATCAGGGGC AACTCACGTT TCCATGGCGG
CGTTATGCCA TTGGTCAGAG TTATCGCGGT GAACGTCCTG GTCGTGGCCG CTACCGCGAG
TTGTGGCAGG CTGATATCGA TATCGTCGGA TCGGCGTCGC CGGTGGCGGA CGCCGAGATT
CTTGCAGTGT TGACCGATGC GCTGACCGCG CTTGGATTCA CCGGTTTTAC GACCCTCATC
AGCCATCGTC AGGTTCTTGG CGGCATCGCG CGCGTTTCTG GTCTTGATGA TGCATCCGCC
GGCAATGTCT ACCGCGCCAT CGACAAACTC GACAAGATTG GCATTGATGG CGTGCGCAAC
GAATTGTTGC AGAGCGGCGT GACGCCTGAC GCCGCTGAGC GCATTCTGGC GCTGATCGAT
CTGTATGGCA GCGCGGACGA TGTGCTGAAT GAACTGGCGC AGCGGTTGCA CGACGACGAG
CGGGCGCAAC AGGCAATCGA CAATCTGCGC GCGATCATCG GCTATGCGCG CGCTATGGGC
GTGCCTGAGG AGCGGATCGC GATCGCACCG CGCCTGGCGC GCGGGTTGTC GTACTACACC
GGCGCCGTCT TCGAATCGAT CATCCAGGAG CCGCCGATGG GGTCGCTGCT CGGCGGCGGG
CGCTACGATG AGTTGATCGG CATGTTCGCC GGGCGCTCGA TCCCTACGGT CGGGCTGGCG
TTTGGCATCG AACGGTTGCA CGATGTGATG GAAGCATTGG GAATGGGACC GGAGTCACGG
ACTATTGCGG TGGCGCTGGT GACGCTCTTC AACCCTGAGA TGGCGATGGA GAGTCTGGGT
TTGGCGCAGG AGTTGCGCCG GGCAGGGTTG ATGATCGAGA CGACGCTCGA CCCCTCCGAA
AAACTTGGGC GGCAACTCCA GTATGCGGAC CGACGCGGCA TTCCGTATGC GCTGGTGCTT
GGTCCCGATG AACTGGCGCG CGGAGAAGTC GTTGTGAAAC ATCTGCGCAG TGGTGAGCAA
CGGAGTGTGG CGCGCAGCGC CGTTGCCGGC ATGCTGCACG CGGCTGCGGA AGCGCAGCGC
ACCCCGCGAA TAGCGAATGA GCAGGGAGGC ATCCATGAGC GATAG
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| Protein sequence | MSSRVQNIRG MRDHLPSAMI LRQHIINTLT SVFERYGFEP LQTPIVEYAE TLDGKIGDDE
KLIYRFEDHG GRKVALRYDQ TVPLARVVAQ YQGQLTFPWR RYAIGQSYRG ERPGRGRYRE
LWQADIDIVG SASPVADAEI LAVLTDALTA LGFTGFTTLI SHRQVLGGIA RVSGLDDASA
GNVYRAIDKL DKIGIDGVRN ELLQSGVTPD AAERILALID LYGSADDVLN ELAQRLHDDE
RAQQAIDNLR AIIGYARAMG VPEERIAIAP RLARGLSYYT GAVFESIIQE PPMGSLLGGG
RYDELIGMFA GRSIPTVGLA FGIERLHDVM EALGMGPESR TIAVALVTLF NPEMAMESLG
LAQELRRAGL MIETTLDPSE KLGRQLQYAD RRGIPYALVL GPDELARGEV VVKHLRSGEQ
RSVARSAVAG MLHAAAEAQR TPRIANEQGG IHER
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