Gene Rcas_0119 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0119 
Symbol 
ID5537579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp141788 
End bp142405 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content61% 
IMG OID640892284 
Producthypothetical protein 
Protein accessionYP_001430273 
Protein GI156740144 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.460598 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones28 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCGAGA TTGTGATCGT CAACACGCGC CCTGAGCATA TCGACCAACT GGTGCAGCAT 
CAGCGCATCT GCTTTCCAAC GCTCGCCGAC CACGAACTGA TGCGGCGTGA GCATTTCGAG
TCACAGTTGC GCCTTTTCCC CGAAGGGCAG CATGTGGCGC TCGATGGGGA TCGAGTCGTC
GGGCAGAGCA GTACATTCCG TATCAGCGGC GCCATCGCGC TGGCGCCGCA CACCTACCAC
TGGATCGTCG CCGGGAACTT TTTCACTAAC CATGATCCAG AGGGAGAATG GCTCTACGGC
GCTGATATGA GCGTGCATCC CGACTATCGG GGGCGCGGCA TTTCACGCAT GCTCTACAAT
GCGCGCAAAG ACCTGGTGCG ACGCCTGGGG TTGCGCGGTA TGGTCGGCGG CGGCATGATT
CCCGGATATG TGCGCTACCG CGACCAGATG AGTCCGTTGG AGTATGCGCA GGCGGTCGCT
GCCGGTCTTC TGACCGACCC GACGCTGACG CCGCAACTGC GCGCAGGCTT CGAACTGCGC
GGCATCCTGC CCAATTATAT CGAGGCAGGC GAACTGGGCA ATGACTCGAC ACTGATTGTC
TGGGAGAACC GGGGGTGA
 
Protein sequence
MSEIVIVNTR PEHIDQLVQH QRICFPTLAD HELMRREHFE SQLRLFPEGQ HVALDGDRVV 
GQSSTFRISG AIALAPHTYH WIVAGNFFTN HDPEGEWLYG ADMSVHPDYR GRGISRMLYN
ARKDLVRRLG LRGMVGGGMI PGYVRYRDQM SPLEYAQAVA AGLLTDPTLT PQLRAGFELR
GILPNYIEAG ELGNDSTLIV WENRG