Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0119 |
Symbol | |
ID | 5537579 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 141788 |
End bp | 142405 |
Gene Length | 618 bp |
Protein Length | 205 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 640892284 |
Product | hypothetical protein |
Protein accession | YP_001430273 |
Protein GI | 156740144 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 11 |
Plasmid unclonability p-value | 0.460598 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 28 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAGCGAGA TTGTGATCGT CAACACGCGC CCTGAGCATA TCGACCAACT GGTGCAGCAT CAGCGCATCT GCTTTCCAAC GCTCGCCGAC CACGAACTGA TGCGGCGTGA GCATTTCGAG TCACAGTTGC GCCTTTTCCC CGAAGGGCAG CATGTGGCGC TCGATGGGGA TCGAGTCGTC GGGCAGAGCA GTACATTCCG TATCAGCGGC GCCATCGCGC TGGCGCCGCA CACCTACCAC TGGATCGTCG CCGGGAACTT TTTCACTAAC CATGATCCAG AGGGAGAATG GCTCTACGGC GCTGATATGA GCGTGCATCC CGACTATCGG GGGCGCGGCA TTTCACGCAT GCTCTACAAT GCGCGCAAAG ACCTGGTGCG ACGCCTGGGG TTGCGCGGTA TGGTCGGCGG CGGCATGATT CCCGGATATG TGCGCTACCG CGACCAGATG AGTCCGTTGG AGTATGCGCA GGCGGTCGCT GCCGGTCTTC TGACCGACCC GACGCTGACG CCGCAACTGC GCGCAGGCTT CGAACTGCGC GGCATCCTGC CCAATTATAT CGAGGCAGGC GAACTGGGCA ATGACTCGAC ACTGATTGTC TGGGAGAACC GGGGGTGA
|
Protein sequence | MSEIVIVNTR PEHIDQLVQH QRICFPTLAD HELMRREHFE SQLRLFPEGQ HVALDGDRVV GQSSTFRISG AIALAPHTYH WIVAGNFFTN HDPEGEWLYG ADMSVHPDYR GRGISRMLYN ARKDLVRRLG LRGMVGGGMI PGYVRYRDQM SPLEYAQAVA AGLLTDPTLT PQLRAGFELR GILPNYIEAG ELGNDSTLIV WENRG
|
| |