Gene Rcas_0098 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0098 
Symbol 
ID5537557 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp118188 
End bp118604 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content57% 
IMG OID640892262 
ProductCna B domain-containing protein 
Protein accessionYP_001430252 
Protein GI156740123 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.685071 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCATCGCA GCCATCATCG CACTTGCCCG CTTCTTTCGC TCGCACTCAT CGCCATCGTC 
GCTCTTCTTC CCCTGCTTGT GCCGGCGTCC GTCGCTTCTG CAAGTGAACC TGTTCTGGTG
AAGTCGTTCC AGAAAGCGTA TGATGTCAAT TGGCACGACT CTGTAGTAAT CAACGGTGTG
TTTTTCTTCA TCGCCAATGA TGGAATCCAT GGTCCTGAGT TGTGGCGCAG CGACGGCACA
ACCGACGGCA CGCGCCTGGT GAAGGACATC CGCCCCGGCG TTGATGGCGC CGATCTCTCG
CGGTTCCACG TCGTCGGCGA TGTTCTCTTC TTTGTCGCCA ATGATGGGGT TCACGGACAC
GAATTATGGC GCAGCGACGG CACAACCGAC GGCACGTTCA TGGTCGAATG CCAATGA
 
Protein sequence
MHRSHHRTCP LLSLALIAIV ALLPLLVPAS VASASEPVLV KSFQKAYDVN WHDSVVINGV 
FFFIANDGIH GPELWRSDGT TDGTRLVKDI RPGVDGADLS RFHVVGDVLF FVANDGVHGH
ELWRSDGTTD GTFMVECQ