Gene Rcas_0097 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0097 
Symbol 
ID5537556 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp117561 
End bp117968 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content68% 
IMG OID640892261 
ProductCna B domain-containing protein 
Protein accessionYP_001430251 
Protein GI156740122 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value0.503159 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTGCG GTCAGGCATT TATAACGTCG CAGACCGACC TGTACGTCCT TCTCCTGAAT 
CCCGATCGCT GCACGATCAG CGGGTGCGTG ACCGACAACG CCGGGCGCGG CGTGGTGGGT
GCGACGGTGC GGGCAGGCGC GCAGAGCGCC ACCACCGATG CCGACGGGTT CTACACGCTG
AGCGGGCTGC CGATGGGAAC CTACACCCTC ACTGCGGCGC TGAGCATCTA TCAGATCACG
TCGGTCAGTC GCACCGTGAC GGTCAGCAGC GACGTGAGCG GGCAGGATTT CAGCGCTGTG
CCGCTCGCTC ACCTATCGCA TCAGCGGGCG CGTGACCGAC GGGGCGGGGC GCGGCGTGGC
GGGCGCGACG GTGCAGGCAG GTGCGCAGAG CGCCGCGACG GATGCTGA
 
Protein sequence
MICGQAFITS QTDLYVLLLN PDRCTISGCV TDNAGRGVVG ATVRAGAQSA TTDADGFYTL 
SGLPMGTYTL TAALSIYQIT SVSRTVTVSS DVSGQDFSAV PLAHLSHQRA RDRRGGARRG
GRDGAGRCAE RRDGC