| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0091 |
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| Symbol | |
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| ID | 5537550 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 113278 |
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| End bp | 113799 |
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| Gene Length | 522 bp |
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| Protein Length | 173 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 640892256 |
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| Product | shikimate kinase |
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| Protein accession | YP_001430246 |
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| Protein GI | 156740117 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0703] Shikimate kinase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 0.10625 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTATGC CAGAGATCAT TGCGCTGGTT GGACTCAGCG GCGGCGGCAA ATCGACGGTG
GCGCGCCATC TGGCAGCGCG CCTCGGCTGG CGGGTGTGTG ACACCGACGG GCTGGTGGAA
CAGATGGCAG GACGGACGAT TCCCGCCATT TTCGCCGATG AAGGGGAAGG CGCCTTTCGT
GAGCGGGAAA CTGTTGCGCT TATGGCGGCG CTCACGGAAC CGAACACCAT CGTTGCAACC
GGCGGCGGCA TTGTGCTGCG CGACCGCAAC CGCGCGCTAC TGAGGGAGAA GGCGTTCGTG
GTGTGGCTCG ACGCGCCGAC CGATGTGTTG ATCGCCCGGT TGCGCGCCCA CGATGAGGAG
CGACCATTGC TGGCAGGAGA CGATCCGGCG GCGCGGCTGG AAACGTTGCG GGCGCAGCGC
GCGGCGCTCT ACCGCGATGT GGCGCATGTG ACGATTGACA CATCGGAAGC CGCGCCGGAG
GATGTGGCGG AACGGATTGT TGGCGCACTT TTCGGGAACT GA
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| Protein sequence | MSMPEIIALV GLSGGGKSTV ARHLAARLGW RVCDTDGLVE QMAGRTIPAI FADEGEGAFR
ERETVALMAA LTEPNTIVAT GGGIVLRDRN RALLREKAFV VWLDAPTDVL IARLRAHDEE
RPLLAGDDPA ARLETLRAQR AALYRDVAHV TIDTSEAAPE DVAERIVGAL FGN
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