Gene Rcas_0087 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0087 
Symbol 
ID5537546 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp109067 
End bp110431 
Gene Length1365 bp 
Protein Length454 aa 
Translation table11 
GC content66% 
IMG OID640892252 
ProductFolC bifunctional protein 
Protein accessionYP_001430242 
Protein GI156740113 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0285] Folylpolyglutamate synthase 
TIGRFAM ID[TIGR01499] folylpolyglutamate synthase/dihydrofolate synthase 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.0279686 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACTACC AGCAGGCGCT CGATTATCTG TACTCATTCA TTGGCGGGCA GCAGGGAGCG 
CAACGACCGC CGCCGATGTT TAATCTGGTG CGCACCCGCG CTCTTCTTGC CGCGCTTGGC
AATCCGCAGC ATGCGATGCC GTCCGTCATC GTCGCCGGCA CGAAGGGCAA AGGTTCGACG
GCTGCGTTTC TGGAGGCGAT AGCGCGCGCC GCCGGTTTGC GCACCGGTCT GTGGACATCG
CCGCACCTGC ACACCTACCG CGAACGTATT CAGGTGAACC GTCAGCCGAT CACCCGCGAC
GAACTGGTGC AGGCGGTTGA GTCGATCCGG CCGATTGTCG AATCAATGGC GAACGGACCC
ATCGGCGCGC CGGTAACGTT TGCAATCGGC TTTGGGTTGG CGCTGCGCTA CTTTGCCGAA
CGCAACGTTG ATCTGGCGAT CCTGGAGGTC GGGGTCGGCG GTCGGTTCGA CAGTGCGGCG
GTTGTCACAC CGATCCTCAG TGTTGTCACG CCGATCAGTT ACGACCACAT GGACCTGTTG
GGCGACACGC TGGCGCAGAT TGCCTGGGAG AAGGCAGGCA TCATGAAACC AGGGACGCCC
GCCATCAGCG CGCCGCAGCA TCCAGAGGCG CTGGGAGCGC TGATCCGCTG CGCCGCAGAG
ATCGGCGCGC CGCTCTATGT GGTGCAGGAC GCAGCGCCGG AGTCAGCGGT TGTTTGCGAG
CCGTTTCTGC CTGGACCCTG GCGCATTCCC GCCGAGCGCT ACCTGGAGGT CGAGCCGCAG
CAACGTTTCC AGCGCGACAT CATGCCATCA CTTCCCGGAA TTTTCCAGGT CGTGAATGCG
CGCCTGGCGA CCGGCGCGGC GTTGCTCCTG CGCGACGCGG GGCTGCCGAT CACCGACGCG
GCGATTGCCG CCGGGCTGGC AAGCGCGCGT TGGCCCGGTC GGATGGAGAT CATCGACGGA
TCGCCGCCGA TCGTGCTCGA CGGCGCGCAC AATGGCGAGT CGATCCAACA ACTGGTCGTG
TCGCTCAACC GCATCTTTCC CGGCAGGCGG TGCGTCATCG TGTTTGGCGC CTCGCGCGAC
AAGGACCTGG CGCGCATGAT CCCGGCGCTG GCGCCGGCAA TCGATGCGTT GGTGTTAACC
GCCTCGCGTC ACCCGCGCGC GCTGGTGGCG CTTCACGAAT TGCGCCAGCA GTTCGCGCCG
CTGGTGCGCA GCGATACGCC GATCGACATT GTGATCGATC CGGCAGAGGC GCTGGCGCGC
GCTCAAGACC TTGCCGCGCC CAACGACCTG ATCTGCGTCA CCGGATCGCT CTTCGTCGTC
GCTGCCGCGC GCGAGGCGCT CGGTCTCGCC GGGGAACGCG ATTGA
 
Protein sequence
MDYQQALDYL YSFIGGQQGA QRPPPMFNLV RTRALLAALG NPQHAMPSVI VAGTKGKGST 
AAFLEAIARA AGLRTGLWTS PHLHTYRERI QVNRQPITRD ELVQAVESIR PIVESMANGP
IGAPVTFAIG FGLALRYFAE RNVDLAILEV GVGGRFDSAA VVTPILSVVT PISYDHMDLL
GDTLAQIAWE KAGIMKPGTP AISAPQHPEA LGALIRCAAE IGAPLYVVQD AAPESAVVCE
PFLPGPWRIP AERYLEVEPQ QRFQRDIMPS LPGIFQVVNA RLATGAALLL RDAGLPITDA
AIAAGLASAR WPGRMEIIDG SPPIVLDGAH NGESIQQLVV SLNRIFPGRR CVIVFGASRD
KDLARMIPAL APAIDALVLT ASRHPRALVA LHELRQQFAP LVRSDTPIDI VIDPAEALAR
AQDLAAPNDL ICVTGSLFVV AAAREALGLA GERD