| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0085 |
|---|
| Symbol | |
|---|
| ID | 5537544 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 105460 |
|---|
| End bp | 106272 |
|---|
| Gene Length | 813 bp |
|---|
| Protein Length | 270 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 63% |
|---|
| IMG OID | 640892250 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430240 |
|---|
| Protein GI | 156740111 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 12 |
|---|
| Fosmid unclonability p-value | 0.0307887 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCACCC GCTTCTCGCG CCCTCGCCTG ATCGATGAAA CCGATCAGCG GTATCGCGCG
CACGTTGAGC AAATGAAACT ATTGCGCAGC AATCAGCGCG CCATCCGCCC TCCCCGTGCG
CGCGACCTGT TCGGCAGCGA GGCGGAAGCG GCGCTCCGCG ACTGGCTGGC GCAGCAGATC
ACGCTGTCCG AACGGCGCAT TGTCGAATAT CTGGAGCATC GCGGACGGCA GGCGGTCACC
AAGTATCGCG AACTTGATGC GGTGTGGATT CTCGATCCAA AGACGATCCA CGTCTTTGAG
ATCAAAGCCA GTATGAAGGC TGCGAGCCTG CGCCGCGCGA TCCGTCAACT GCGCGACACG
CAGACCATCC TGCGCATGCT GTTCCCGAAG GTTCACACCA CGATTTTGCT GGTCGACACC
GGCATTCCGC AGACGCCGGA AGAGTCGGCG GCGCAGCTTG CCGAATGGAT CGCAACGCAT
CCGGATCGCC CACCGCCGAA TGAACCGCCA CCAACGCTCG CCGATGTCCT GGCGAATCTG
CCGCAGGTGC GCCGGGCGGA CTCGCTCGCC GCGTTGCCGG ACGATCCTGA GTTGGTCGGG
TTGATTCGCT TCTCGGTAGA CGACATCATC GCGCTGGCAG GCGCCGAGAA CCTGCACCTC
GACTGGGACG AGGACGAAGA AGAGGAAGGG GACGCTGAAA CCAGCGAGGC TGCACCGTAC
ATCTACTCTT CTTCTGAGTC GGAACCGGAC GAGGAGGACA ATCCGCTGGC GGCGGCGCTG
CGGAAGGCGA TGGAGGATCG TGCGAGGGGA TGA
|
|---|
| Protein sequence | MTTRFSRPRL IDETDQRYRA HVEQMKLLRS NQRAIRPPRA RDLFGSEAEA ALRDWLAQQI
TLSERRIVEY LEHRGRQAVT KYRELDAVWI LDPKTIHVFE IKASMKAASL RRAIRQLRDT
QTILRMLFPK VHTTILLVDT GIPQTPEESA AQLAEWIATH PDRPPPNEPP PTLADVLANL
PQVRRADSLA ALPDDPELVG LIRFSVDDII ALAGAENLHL DWDEDEEEEG DAETSEAAPY
IYSSSESEPD EEDNPLAAAL RKAMEDRARG
|
|---|
| |