| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0083 |
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| Symbol | |
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| ID | 5537542 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 103142 |
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| End bp | 104125 |
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| Gene Length | 984 bp |
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| Protein Length | 327 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 640892248 |
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| Product | ribose-phosphate pyrophosphokinase |
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| Protein accession | YP_001430238 |
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| Protein GI | 156740109 |
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| COG category | [E] Amino acid transport and metabolism
[F] Nucleotide transport and metabolism |
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| COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
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| TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 0.0312629 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTAGTC GCTTTGATGA GCTTCGCATT CTTTCGGGCA ATGGCAACCC TGCCCTGGCG
CAGTCCATCT GCGGTCGCCT GGGGGTGCGC CTGGGAGACG TAACGATCAC CCGCTTTGCC
AATGAGAATA TTTTTGTGCG CCTGAATGAA AGCGTGCGCG AGAAAGATGT GTTTGTCATT
CAGTCGTTGG CGTCGCCCTT GAGCGACCGC ATTCTCGAAC TGCTGATCAT GCTGGACGCC
TGCAAACGCG CATCTGCCGG GCGGGTGACG GCGGTGCTGC CGTTCTACGC CTACGGGCGC
ACCGATAAGC GTGATCAACC ACGGGTGCCG ATCACCGCGC GATTACTCGC TGATATGATC
CAGGTTGCCG GTGCGCAGCA AGTGGTAACG ATCGACCTGC ACGCCGGGCA GATTCAAGGG
TTTTTCAGCA TTCCCGTCGA TGAGTTGAGC AGCATGCCGT TGCTGGTGCG CTACTTCCGC
GATCGCGGAT GGGACGATGT GGTGGTCGTG TCGTCGGACA TCGGGTTTGC CAAGCGGGCG
CGCAATTTCG CCGAACAACT CGGGACGCCG CTGGCAATCA TCGAAAAGCG TCACCCGGCG
CGCGCCGATG CCGAGAGCGA AAACGGCATC GAGGCAATGT CGCTGATCGG CGAGGTCGCC
GGACGGCGCT GCATCCTGGT GGATGATGAA GTGAACACCG GACGCTCGCT CGCCAGTGCA
GCAGAACTGC TGGAACGCCA TGGCGCGCGC GAGATCTACG CAGCCGTTGC CCATCCGGTG
CTCGGCGGCG ATGGACCGGA ACGCCTGCGC GCCAGTCGCA TCCGCGAATT GGTGACGACC
GATACGCTGC CGGTTCCGGC GGAAAAATCG TGGCCCGGCC TGCGCATCCT GACTGTCGCT
CCAATGCTGG CGGAGGTCAT TCAACGCATC CATAGCGGCG TCTCAGTGCA TACCATCTTC
CCGCCGCGCG CGCTGGCGCG GTGA
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| Protein sequence | MSSRFDELRI LSGNGNPALA QSICGRLGVR LGDVTITRFA NENIFVRLNE SVREKDVFVI
QSLASPLSDR ILELLIMLDA CKRASAGRVT AVLPFYAYGR TDKRDQPRVP ITARLLADMI
QVAGAQQVVT IDLHAGQIQG FFSIPVDELS SMPLLVRYFR DRGWDDVVVV SSDIGFAKRA
RNFAEQLGTP LAIIEKRHPA RADAESENGI EAMSLIGEVA GRRCILVDDE VNTGRSLASA
AELLERHGAR EIYAAVAHPV LGGDGPERLR ASRIRELVTT DTLPVPAEKS WPGLRILTVA
PMLAEVIQRI HSGVSVHTIF PPRALAR
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