Gene Rcas_0081 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0081 
Symbol 
ID5537540 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp102424 
End bp102759 
Gene Length336 bp 
Protein Length111 aa 
Translation table11 
GC content50% 
IMG OID640892246 
Producthypothetical protein 
Protein accessionYP_001430236 
Protein GI156740107 
COG category[S] Function unknown 
COG ID[COG4634] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0127651 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGGTTGC TTTTCGACCA CAACATGTCG CCACGTCTGG TGCGTTCTCT TTCTGATCTC 
TATCCAGACT CCAGCCATGT TTCTCTGGTT GGTCTCGCTA CAGCCGATGA TAGAACAGTC
TGGCAGTATG CTCAGACGCA CGATTACATC ATCGTTACCA AAGACTCCGA TTTCAGCGAT
ATAAACGTGT TGCTCGGCTT TCCGCCGAAG ACTCTCTGGC TGCGCCTGGG TAATTGCACG
ACTGGTGATA TCGAACGGGC ATTGCGAAAC GGGCATATGG CCATTACCAA CTTCGCTGCC
GATCCGACTA TCGGTACGCT TGAGTTGTTT GAATAA
 
Protein sequence
MRLLFDHNMS PRLVRSLSDL YPDSSHVSLV GLATADDRTV WQYAQTHDYI IVTKDSDFSD 
INVLLGFPPK TLWLRLGNCT TGDIERALRN GHMAITNFAA DPTIGTLELF E