| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0080 |
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| Symbol | |
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| ID | 5537539 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 101058 |
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| End bp | 102074 |
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| Gene Length | 1017 bp |
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| Protein Length | 338 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640892245 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430235 |
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| Protein GI | 156740106 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00132496 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCCGCAT TGAACACAAG GAGAGCGCTG CTCGACAAGC GATTGATCGT CTTCGGTGTT
CTCGTTGGTC TCGCCATACG CCTGTGGATC GCCTGGCAGC CAACAGATGA ACTTTCGTGG
CGCGCAAACG CCGACGATGC CTACTACTAC TTCAAACTGG CACAACATCT CGGTTCAGGC
GCGGGCGCCA CATTCGATGG CGTGAACCCG ACCAATGGCT TTCATCCGCT CTATGCGTTG
CTTCTCGTGC CAATCTTTCA GTACGTCGGC AACGACATTG ATCGTGGCGT CCATCTGGCG
CTTACCCTGG TTGCGCTGGT AAGCAGCGTA ACAGCCTGGC CAATTTACCT TGCCGGAAAG
TACGTTCACT CTCCTCTTGC CGGCGCCATC GGAGCATTGG CGCATCTCCT CAATCCATGG
GTTGTCGTTC TGACAATGAC CGGGGTAGAG TCGGCTGTGT ATGTGTGCTG CTTTGCCTGG
ACGGTAATGG CATATGTGAG ATGGAGATCG CACGAGCAAT CGCTTCATGG GATCGTTTTG
ATCGGTTTAC TGGCCGGACT GACAATAATG GCGAGGTCTG AAGGTGTTTT GTTGCTGGCG
GGGATTGTCC TTGATCGACT GGTTGTGGAT CGGCGAATGC CCGAGCGAGC AATTGTTTTT
GCAACGCTTT GCGGACTGTT CGCTGCCATC GTGTGCCTGC CATGGGTTCT CTGGAGCATA
TCCCGGTTTG GAACCCCTCT TCAGATCAGT GCTAGCGCGA TCATGCTGCA CAGCTACGCG
GGGATGCCGG CAGATGCGAT AGCAGCGGTC GAATGGTATA TTGGACGCAT ATCCTGGTTC
TTGCCCCGCT ATGCGTACAA GATTCTTCCT GTTCAATCTT CCCATTGTAC TCTTGTTCGG
GGTCGTGATC GGGCGATCAT GGTCGACTCG TCAACTATCC CTGAAGATAG CCTGGTCACC
TGCTTCACAG TCTTCATTTC TCATCCTGCC GTTTATTTGT ATCACCGCCT ATTATAA
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| Protein sequence | MSALNTRRAL LDKRLIVFGV LVGLAIRLWI AWQPTDELSW RANADDAYYY FKLAQHLGSG
AGATFDGVNP TNGFHPLYAL LLVPIFQYVG NDIDRGVHLA LTLVALVSSV TAWPIYLAGK
YVHSPLAGAI GALAHLLNPW VVVLTMTGVE SAVYVCCFAW TVMAYVRWRS HEQSLHGIVL
IGLLAGLTIM ARSEGVLLLA GIVLDRLVVD RRMPERAIVF ATLCGLFAAI VCLPWVLWSI
SRFGTPLQIS ASAIMLHSYA GMPADAIAAV EWYIGRISWF LPRYAYKILP VQSSHCTLVR
GRDRAIMVDS STIPEDSLVT CFTVFISHPA VYLYHRLL
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