| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0071 |
|---|
| Symbol | |
|---|
| ID | 5537530 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | - |
|---|
| Start bp | 89188 |
|---|
| End bp | 89430 |
|---|
| Gene Length | 243 bp |
|---|
| Protein Length | 80 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | 640892237 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001430227 |
|---|
| Protein GI | 156740098 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0372665 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 4 |
|---|
| Fosmid unclonability p-value | 0.00000665883 |
|---|
| Fosmid Hitchhiker | Yes |
|---|
| Fosmid clonability | hitchhiker |
|---|
| |
Sequence |
| Gene sequence | ATGACTCACC GACCGCGCTG GAACTCGCTG AGCGCCATGC TGCGGCATGC GCTGCGGCAG
CAGGAGTGGC TCTCGCTGCG CGACGCCGCC GCCCTGTACC GCGTCACCGA CGAGACGATG
CTGGCGTGGG TGCGGGCGGG CGTCTTCCCG TCCCGAACCT TCGAGGGGCG CATCTGGGTG
GCGCGCGCCG ATCTCGAAGC CGCACTGCGC CGCAAACCGG GGGAGTGTGA TGGCGCATCC
TGA
|
|---|
| Protein sequence | MTHRPRWNSL SAMLRHALRQ QEWLSLRDAA ALYRVTDETM LAWVRAGVFP SRTFEGRIWV
ARADLEAALR RKPGECDGAS
|
|---|
| |