Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0070 |
Symbol | |
ID | 5537529 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 88782 |
End bp | 89201 |
Gene Length | 420 bp |
Protein Length | 139 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 640892236 |
Product | hypothetical protein |
Protein accession | YP_001430226 |
Protein GI | 156740097 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0485688 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.00000723825 |
Fosmid Hitchhiker | Yes |
Fosmid clonability | hitchhiker |
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Sequence |
Gene sequence | ATGGCGCATC CTGATCGTTG CGACTCGCTG ATTAATGCGC TGAGGCGCGC GCTGGATGCA GCGCACGCAG CAGCAACCGG CGTCGTCGCT GACGACGCCT CGGTTGGTGA CGGTGCGCCG TCATCGGATC CGTCGTCGCT GCCGGTTGAG CGGCTGGAAG CGATCATCAC GCTGCTGGCG ACGGCGCCGA CGATTGGGGC GGCGACGCCG CCGGGCGTCA CCAAAGGACG CCTGGCGGCG CTGCTACCTC CAGAAGAGCG GCGGCACGCC GGACGGATCA TGGAATGGCT CGACCGGGCG GGTGTGCTGG TCGAGCCGCG CTCCGAAGCC GTGCGATGGC GTGAGCCGCG CCCGTTGCGC GGTGAGGACA TCGCGGATCT CATCCGACGG GTTCAGTCGG TAGCCAGGGA GGCAGCATGA
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Protein sequence | MAHPDRCDSL INALRRALDA AHAAATGVVA DDASVGDGAP SSDPSSLPVE RLEAIITLLA TAPTIGAATP PGVTKGRLAA LLPPEERRHA GRIMEWLDRA GVLVEPRSEA VRWREPRPLR GEDIADLIRR VQSVAREAA
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