Gene Rcas_0070 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0070 
Symbol 
ID5537529 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp88782 
End bp89201 
Gene Length420 bp 
Protein Length139 aa 
Translation table11 
GC content69% 
IMG OID640892236 
Producthypothetical protein 
Protein accessionYP_001430226 
Protein GI156740097 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0485688 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.00000723825 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGCGCATC CTGATCGTTG CGACTCGCTG ATTAATGCGC TGAGGCGCGC GCTGGATGCA 
GCGCACGCAG CAGCAACCGG CGTCGTCGCT GACGACGCCT CGGTTGGTGA CGGTGCGCCG
TCATCGGATC CGTCGTCGCT GCCGGTTGAG CGGCTGGAAG CGATCATCAC GCTGCTGGCG
ACGGCGCCGA CGATTGGGGC GGCGACGCCG CCGGGCGTCA CCAAAGGACG CCTGGCGGCG
CTGCTACCTC CAGAAGAGCG GCGGCACGCC GGACGGATCA TGGAATGGCT CGACCGGGCG
GGTGTGCTGG TCGAGCCGCG CTCCGAAGCC GTGCGATGGC GTGAGCCGCG CCCGTTGCGC
GGTGAGGACA TCGCGGATCT CATCCGACGG GTTCAGTCGG TAGCCAGGGA GGCAGCATGA
 
Protein sequence
MAHPDRCDSL INALRRALDA AHAAATGVVA DDASVGDGAP SSDPSSLPVE RLEAIITLLA 
TAPTIGAATP PGVTKGRLAA LLPPEERRHA GRIMEWLDRA GVLVEPRSEA VRWREPRPLR
GEDIADLIRR VQSVAREAA