| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0068 |
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| Symbol | |
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| ID | 5537527 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 83942 |
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| End bp | 85336 |
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| Gene Length | 1395 bp |
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| Protein Length | 464 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640892234 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430224 |
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| Protein GI | 156740095 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.00010049 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 8 |
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| Fosmid unclonability p-value | 0.00158155 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCGATAC AGCGTGCGCT CAATCTTGAC TTTCCAGGCG CGCAATCGGA TGCTCCGCTC
TTGCGTGATC CGGCGTTCGA GCAAAACAAA CAAGATGCAA TCCATCGCTG GGTTCCATGG
ATTGCAGGTT TCTCAGCAGG CTTCGTCAGC GATGCATTGC AGCAGTATCT TCCGGATCCG
GGACGGAGAG ACGTTCACGT GCTGGATCCA TTTGCGGGAA TTGGCACAAC GCTCGTCGAG
AGTTTGCGAC GTGGGTATCA CGTGACCGGC ATCGAGATCA ATCCTTTTGC CGCGCTCGCT
TCACGGGTCA AATGTTCGGC ATTTACGATT GAGCCTGATA CGTTGTTGTC CGCGATCAGA
ACATTCGAGC GCGAAGCCAG AGAGCGAACT GATCCCATCG ATGCGGCATT TGAGCGCGGC
GATGATCTCC TTCAATGCAC GCCTGCGCCC CGATCACGGC CACCTGTCGC ATTTCGCTCA
CGCACACCGT TTTTCAGCCC GGCGGTTGAG CAGAAGATCC TGCATTGTCT CGATCTCATT
AGTGACGTTG CCAGTTGCCA GATCAGGGAA CTGATGTCGC TGGCTCTGGG ATCAATCCTG
GTGCAGGTGT CCAACTACTC ATACGAGCCG AGTCTTGGAT CGCGCGTCGC GGCTGGCAAG
ACGAATGTAC TCAATGCTGA TGTGGTCAGC CTGCTTTCAT CCAGGCTTCG CATGATGTAT
CACGATGTGA TGGTCTACCG TGATGCCATG ATGCAATGGA CGCCGCTTCC TACTGCTCGG
GTCATTGAGG GCGACTCGCG GTTGATGCCC CAGATGGTGA AGGAGTCGTC GGTTGATATT
GTCATTACTT CACCTCCATA TCTCAATAAC TATCACTATG TGCGCAATAC CCGTCCGCAC
CTGTTCTGGT TCGGCTTTGT CTCGAAACCA TCTGATTTGA AGCGTTTAGA ACAAGCAAAC
TTTGGCAAGT ACTGGCAAAC AGTCCGTAAT GCTGATCCTT CAAAACTTCA GTTCGAACTT
CCCGGTTTGA GTCGAATAAT AGAAGAAATC ACCTTGCGAA ACCCTCAAAA ACATGTGTAT
GGAGGAAAAG GGTGGGCGAA TTATGCAATA GAGTATTTCA ATGACTGTTA TACATTGTGT
CAGAGTTTCT ATCGAGTTCT CAGGAAAGGA ACCCGTGCTA TTGTTGTTTT AGGAAATTCT
ATCATCCAAG GAGTAAACTT TCCCACAGAC CTGTTTTTTG GACAAATTGG CGAACTATGT
CACCTGAAAC TTGATGAAAT TCTTCCATTG CGGAAGAAAC GGGTTGGTAA CAGTATTATC
AATTCTTCGG TTCGCAATGG TGGATCTGAT GTGATTTCAC TCTACGAAGC AGCTGTCATT
CTCCGAAGAG TCTAG
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| Protein sequence | MAIQRALNLD FPGAQSDAPL LRDPAFEQNK QDAIHRWVPW IAGFSAGFVS DALQQYLPDP
GRRDVHVLDP FAGIGTTLVE SLRRGYHVTG IEINPFAALA SRVKCSAFTI EPDTLLSAIR
TFEREARERT DPIDAAFERG DDLLQCTPAP RSRPPVAFRS RTPFFSPAVE QKILHCLDLI
SDVASCQIRE LMSLALGSIL VQVSNYSYEP SLGSRVAAGK TNVLNADVVS LLSSRLRMMY
HDVMVYRDAM MQWTPLPTAR VIEGDSRLMP QMVKESSVDI VITSPPYLNN YHYVRNTRPH
LFWFGFVSKP SDLKRLEQAN FGKYWQTVRN ADPSKLQFEL PGLSRIIEEI TLRNPQKHVY
GGKGWANYAI EYFNDCYTLC QSFYRVLRKG TRAIVVLGNS IIQGVNFPTD LFFGQIGELC
HLKLDEILPL RKKRVGNSII NSSVRNGGSD VISLYEAAVI LRRV
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