Gene Rcas_0064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0064 
Symbol 
ID5537523 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp79986 
End bp80501 
Gene Length516 bp 
Protein Length171 aa 
Translation table11 
GC content56% 
IMG OID640892230 
Producthypothetical protein 
Protein accessionYP_001430220 
Protein GI156740091 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00583622 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value0.1124 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACAACAG GAACGCAAGC CAGTACACAA AGTGTAACAC TGCGATACAC CCATACGCTC 
GATGAGCAAC TGCATGCTTG CCGGCTCTAC CAACGTTCGA CACGCAAGCA TCTGTTCTAC
AAGTTCGTTG CGATTGTCGC TATCTTTAGC GCCGTCTGGA TCGTGTTTAC CGTGGGAGTG
CAACCGGCGG CGCTGTTGCT GCTGGCGCTG GGGCTGTTCA CATGGTTCGA TCCCGTCCCT
TTACTCCTGG TCTGGTCCAC ATTTCGCAGC AGCCCGGCGT TGCGCCAGCC AATCGAAACG
GTCGTTGATC GAAAGGGTGT CCATTTTCGC TTCGGCGCGG AGCGCGTCAG TCGATCCTGG
GAGCGGTATC AATCGTTCGC CGAGAGTGAT CGCGTCTTTG TTCTGATCCA CGGTCGCTGG
GCGTATTCGG TCGTGCCAAA ACGCGCCTTT GCAGATCGGA AAGCAATCGA CGAGTTTCGG
GAACTTTTGC GCGCAAACAT CCGTCGTTCT CCATGA
 
Protein sequence
MTTGTQASTQ SVTLRYTHTL DEQLHACRLY QRSTRKHLFY KFVAIVAIFS AVWIVFTVGV 
QPAALLLLAL GLFTWFDPVP LLLVWSTFRS SPALRQPIET VVDRKGVHFR FGAERVSRSW
ERYQSFAESD RVFVLIHGRW AYSVVPKRAF ADRKAIDEFR ELLRANIRRS P