Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0064 |
Symbol | |
ID | 5537523 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | + |
Start bp | 79986 |
End bp | 80501 |
Gene Length | 516 bp |
Protein Length | 171 aa |
Translation table | 11 |
GC content | 56% |
IMG OID | 640892230 |
Product | hypothetical protein |
Protein accession | YP_001430220 |
Protein GI | 156740091 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.00583622 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 15 |
Fosmid unclonability p-value | 0.1124 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACAACAG GAACGCAAGC CAGTACACAA AGTGTAACAC TGCGATACAC CCATACGCTC GATGAGCAAC TGCATGCTTG CCGGCTCTAC CAACGTTCGA CACGCAAGCA TCTGTTCTAC AAGTTCGTTG CGATTGTCGC TATCTTTAGC GCCGTCTGGA TCGTGTTTAC CGTGGGAGTG CAACCGGCGG CGCTGTTGCT GCTGGCGCTG GGGCTGTTCA CATGGTTCGA TCCCGTCCCT TTACTCCTGG TCTGGTCCAC ATTTCGCAGC AGCCCGGCGT TGCGCCAGCC AATCGAAACG GTCGTTGATC GAAAGGGTGT CCATTTTCGC TTCGGCGCGG AGCGCGTCAG TCGATCCTGG GAGCGGTATC AATCGTTCGC CGAGAGTGAT CGCGTCTTTG TTCTGATCCA CGGTCGCTGG GCGTATTCGG TCGTGCCAAA ACGCGCCTTT GCAGATCGGA AAGCAATCGA CGAGTTTCGG GAACTTTTGC GCGCAAACAT CCGTCGTTCT CCATGA
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Protein sequence | MTTGTQASTQ SVTLRYTHTL DEQLHACRLY QRSTRKHLFY KFVAIVAIFS AVWIVFTVGV QPAALLLLAL GLFTWFDPVP LLLVWSTFRS SPALRQPIET VVDRKGVHFR FGAERVSRSW ERYQSFAESD RVFVLIHGRW AYSVVPKRAF ADRKAIDEFR ELLRANIRRS P
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