Gene Rcas_0058 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0058 
Symbol 
ID5537516 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp71729 
End bp71950 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content55% 
IMG OID640892223 
Producthypothetical protein 
Protein accessionYP_001430214 
Protein GI156740085 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTATGT CTGGCAAGAA AGATGCCGTT CTGCACCATA TCCAACTGAT TGACATCCAC 
GGAACCCGTT TCTATGACAT CATCTTTGCT CACATCGATG CGCCCGACCA GGCGCGCCGT
GCCCGGATCG GCGTGGACGA CGCCTATCCT GATCCGCAGC CCGGCGATGC CATCAGCGTT
TCTTATCTGA TGAATGTGGT CACCGGCATT GCACGGCGGT AA
 
Protein sequence
MIMSGKKDAV LHHIQLIDIH GTRFYDIIFA HIDAPDQARR ARIGVDDAYP DPQPGDAISV 
SYLMNVVTGI ARR