Gene Rcas_0056 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0056 
Symbol 
ID5537514 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp70217 
End bp70438 
Gene Length222 bp 
Protein Length73 aa 
Translation table11 
GC content63% 
IMG OID640892221 
Producthypothetical protein 
Protein accessionYP_001430212 
Protein GI156740083 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.641487 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones30 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGACCA TCGAACAGGT GCTGGAATAT CTGGAGCGCC GGATCGCCGA GCATCATCTT 
GCCGGCGACC GCCTGGCGCT CAAACGCGAT CAGGACGTCG CCGGGTTTTT GATGGCTGCG
GCGCGCGACT CAGGCGATAA GCACCTTGCG CTCCGTTTCC AGGTGCTTGC GGCGCGCGCC
GCCGATCTGC GCGAGCAATT GGAACCTGAC GCAACATCGT GA
 
Protein sequence
MLTIEQVLEY LERRIAEHHL AGDRLALKRD QDVAGFLMAA ARDSGDKHLA LRFQVLAARA 
ADLREQLEPD ATS