Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Rcas_0051 |
Symbol | |
ID | 5537509 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Roseiflexus castenholzii DSM 13941 |
Kingdom | Bacteria |
Replicon accession | NC_009767 |
Strand | - |
Start bp | 66082 |
End bp | 67074 |
Gene Length | 993 bp |
Protein Length | 330 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 640892216 |
Product | hypothetical protein |
Protein accession | YP_001430207 |
Protein GI | 156740078 |
COG category | [S] Function unknown |
COG ID | [COG3595] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0950481 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 38 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGATGCGC CAAACCACGA ACGGTACACG ACCAGAAATC TTTCGTCCTC ACCACATGAT GCGCCACCGT CGTCGCACCT GCCAACTGAA CCGCACTATC AGCGGCGAAA CGGCGCCCTG ATTGCAGGAT GGATATTGCT GACGCTCGGA TTGGCGTGGC TCCTGGTTCA ATTTGCAGGT GATCTCATAT CTCCCGGCAG TCGAACCCTG ATCGATCAGA TCGTCGGCGG TCGGCGGATC GAGATCGACG CAGGGAATGC CGATGTCACC ATTATACGCT GGGATCGCCC TGAGTTTCGC GTTCAGGCGC AGCAGGTTGG GTGGTCGATA GGCGACGTCA ATGCCGCAGT GCGCACCAAT GGCGACACCG TGCAGGTTGC TCACCAGTCC AGTTGCTGGC TGTTCTGTGG CAGGCTGCGC TATGAGATTA CGGCGCCGGC TACGGCAGAG GTGCGTGTGA CGACCATCAG CGGCGATGTG CGGATAAAAG CCATCGAAGG CGATACAACG GTCAGCACGA CCAGCGGTGA TGTCCGTCTC GACGGCATCG GCGGCGCTCT GACGGTCAAT ACTGTCAGTG GCAAAGTCAC CCTGCGTTAT GGGCGGGTCT CAAGCGCCAG AGTCGGGACT GCCAGCGGCG ACGTCGATCT CGGCGGCATC AACGGCTCGC TTGCGGTAAC GACCATCTCC GGCAAGATCA AGGTGCGCGA CATCGTGGGA GGTCCGGTAC GCCTGCAAAC GACGAGCGGG AGAGTCAGCG CCGATGGCGC GCTCTCTAGC AACTTCGACA TCACGAGCGT ATCTGGCGAC GTGAGCGTGA AACTTCCCTC GAAGACCGGC TATCTCCTGG TTCTCAGAAC CGTGAGCGGC GACGTTGAGG CGCCAGGCGC GCGCGAGAAA GATGCGCCAC GTGAATGGCG CGCGACCATT GGCGATGGCA CCTATGCGCT CAATATTGCG ACGACGAGCG GCGACATTCG GATCAAGAAA TAA
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Protein sequence | MDAPNHERYT TRNLSSSPHD APPSSHLPTE PHYQRRNGAL IAGWILLTLG LAWLLVQFAG DLISPGSRTL IDQIVGGRRI EIDAGNADVT IIRWDRPEFR VQAQQVGWSI GDVNAAVRTN GDTVQVAHQS SCWLFCGRLR YEITAPATAE VRVTTISGDV RIKAIEGDTT VSTTSGDVRL DGIGGALTVN TVSGKVTLRY GRVSSARVGT ASGDVDLGGI NGSLAVTTIS GKIKVRDIVG GPVRLQTTSG RVSADGALSS NFDITSVSGD VSVKLPSKTG YLLVLRTVSG DVEAPGAREK DAPREWRATI GDGTYALNIA TTSGDIRIKK
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