| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0045 |
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| Symbol | |
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| ID | 5537503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 59089 |
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| End bp | 60288 |
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| Gene Length | 1200 bp |
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| Protein Length | 399 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640892210 |
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| Product | NAD-dependent epimerase/dehydratase |
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| Protein accession | YP_001430201 |
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| Protein GI | 156740072 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0451] Nucleoside-diphosphate-sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 10 |
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| Plasmid unclonability p-value | 0.55488 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 41 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGCATTC TCGTCCTTGG CGGCGACGGC TACCTGGGCT GGCCGACCGC ATTGCACCTC
TCGCAGCGCG GCCACGAGGT GGCTGTCCTC GACAACTTCT CACGGCGACT CTGGGATCAC
GAACTCGGCG CTGAAAGCCT GACCCCTATT GAAACGCTGC AACAGCGCGT CGCAGTCTGG
CGTCAGATCA CCGGTAAGAT CATTACCCCG TTCATTGGCG ATCTGTGCGA TTACACGTTC
CTGGAACCGG TGATCCGCGA TTTCCAACCG GAGGCGGTTG TCCATTTCGG TGAGCAGCGG
AGCGCCCCCT ACTCGATGAT CGACCGCCAG CACGCTGTGT TCACCCACGT CAACAATGTC
GTCGGCACGC TGAACCTGCT CTACGCGCTC GCCGACCATG CGCCGGATTG CCATCTGGTC
AAACTGGGAA CAATGGGAGA GTATGGCACT CCGAATATCG ACATTGAAGA GGGGTACATC
ACCATCACAC ACAAGGGACG CACCGATACC CTCCCCTACC CCAAACAACC CGGCAGCTGG
TACCACGCGA CCAAAGTCCA CGATAGCACC AACATCCTGT TTGCCTGCCG CATTTGGGGA
TTGCGCGCAA CCGACCTGAA TCAGGGGGTC GTCTACGGTG TGGAAACGCC AGAAACAACC
ATGGACCCGC GACTGGCAAC GCGCTTCGAC TACGATGGCG TTTTCGGAAC GGCGCTCAAT
CGCTTCCTGG TGCAGGCGGT CGTCGGCCTG CCACTGACGG TCTATGGAAA AGGCGGGCAG
ACGCGCGGCT TCCTCGATAT TCGCGACACG CTGGCGTGTG TCGAGATTGC CATCCTCAAC
CCGGCGCCAC GCGGTGAACT GCGCGTGTTC AATCAGTTCA CCGAGCAGTT CAACGTCGCC
GGTCTCGCCG AAGCGGTGCG CGAAGCGGCA CAGGAGTTCG GTCTCGATGT CGCCATTCAC
CACCTGCCCA ATCCACGCGT TGAGAAAGAA GAACATTACT ACAATGCCGC AAATACGCGC
CTGCTTGATC TGGGGCTAAA GCCACATTAC CTGAGTGAGA CGCTGCTCGA ATCGGTGATG
CGCGTGGTGA TGCATCACCG TGATCGGGTG CGGCCCGAAT TGATCATGCC CGCCGTCAAC
TGGCGCCGCA CGCACAATCC GGTTCTGCCA ACCGAGGAAC CGGTCATTCA GCAGCCCTAA
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| Protein sequence | MRILVLGGDG YLGWPTALHL SQRGHEVAVL DNFSRRLWDH ELGAESLTPI ETLQQRVAVW
RQITGKIITP FIGDLCDYTF LEPVIRDFQP EAVVHFGEQR SAPYSMIDRQ HAVFTHVNNV
VGTLNLLYAL ADHAPDCHLV KLGTMGEYGT PNIDIEEGYI TITHKGRTDT LPYPKQPGSW
YHATKVHDST NILFACRIWG LRATDLNQGV VYGVETPETT MDPRLATRFD YDGVFGTALN
RFLVQAVVGL PLTVYGKGGQ TRGFLDIRDT LACVEIAILN PAPRGELRVF NQFTEQFNVA
GLAEAVREAA QEFGLDVAIH HLPNPRVEKE EHYYNAANTR LLDLGLKPHY LSETLLESVM
RVVMHHRDRV RPELIMPAVN WRRTHNPVLP TEEPVIQQP
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