| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0042 |
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| Symbol | |
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| ID | 5537500 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 55781 |
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| End bp | 56665 |
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| Gene Length | 885 bp |
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| Protein Length | 294 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892207 |
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| Product | hypothetical protein |
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| Protein accession | YP_001430198 |
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| Protein GI | 156740069 |
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| COG category | [S] Function unknown |
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| COG ID | [COG2912] Uncharacterized conserved protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.00533467 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 37 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTGTGGTA TCATCTGGAC GGTTTCTGTG ATCACTCCTG CGCGCGGTAT GGTTTCGCCT
GCACGCCGTT GTTTTCGCGC CATCGCCCGG TTGCCGGATG ACCGGATCAA CCTGGCGGAG
GCGACGCTCT GTATTGCCTG GGAAGATCAG GGCGATGGCA ATCCGCCGGC GTCGTTGCGG
ATTATTGATG CAATGGCGGA GGCGGCGCGG GAGCGCGTCG CCGGCAGGCG GGATTCGCGC
GCCATTGTCG CCGCATTGAA CAATTACCTG TTCGAGGAAC TTGGATTTCG TGGCAACCAC
TGGAATTACA GTGATCCGGC GAACAGTTTC CTCGATCAGG TCATTGCCCG GCGCGTCGGT
TTGCCTATTC TGCTCTCGGT ACTCTATCTG GAAATCGGAT GGCGGCTGCG GCTGCCGGTG
GTTGGGTTAG CGTTGCCGGG GCATTTTCTG GTGCGCTATA TCGACGCCCG TGAGGGTGAT
CTGTACATTG ATCCCTTCAA CCGCAGCAGG TTGTGGTCAT ATGCGGAATG CGAACGGCAG
ATCGTGTCGT TTGCCGGCGT TGTCGATCCT GCGCTGGTCC GGCAGATTAT GGCGCCGCCG
TCGCCACGGT CAATCCTGAT ACGCATTCTG CGCAATCTGA AGAGCGCCTA TATTCAGCGC
GAACAGTTCG AGCGCGCGCT GGCGGCAGTC GAGCGAATCT TGATCCTGGC GTTCGATGCG
GGCGAGTTGC GGGATCGCGG ATTGTTGCGC GCCCGCCTTG GCCAGTGGTC GGGGGCGCTG
TCCGACCTCG AACGCTATGC GCACCTGGCG CCGCAGGCAA GCGATCTGGA GGCGATCCGG
CAGCGAGCGC AGGCGCTGGC GGATGCGCTG GCGCAGTACA ACTGA
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| Protein sequence | MCGIIWTVSV ITPARGMVSP ARRCFRAIAR LPDDRINLAE ATLCIAWEDQ GDGNPPASLR
IIDAMAEAAR ERVAGRRDSR AIVAALNNYL FEELGFRGNH WNYSDPANSF LDQVIARRVG
LPILLSVLYL EIGWRLRLPV VGLALPGHFL VRYIDAREGD LYIDPFNRSR LWSYAECERQ
IVSFAGVVDP ALVRQIMAPP SPRSILIRIL RNLKSAYIQR EQFERALAAV ERILILAFDA
GELRDRGLLR ARLGQWSGAL SDLERYAHLA PQASDLEAIR QRAQALADAL AQYN
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