| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0038 |
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| Symbol | |
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| ID | 5537496 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 51343 |
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| End bp | 53136 |
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| Gene Length | 1794 bp |
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| Protein Length | 597 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892204 |
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| Product | peptidase M23B |
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| Protein accession | YP_001430195 |
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| Protein GI | 156740066 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 34 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCCTTACC GCCGATTGCT GAATATTCTA ATGACGCTGG CGCTGGTTGC CTGTGCTGCG
CCATCTCCGC CGCCTGCGCC AACGCCACAG GCGGAAACGT CGCTGACCCG TGTGCCTGAT
GGCGCCACGA CGCCTCAGCC GCTGCTCCCG ACCCAAACGA TGGCGCCAAC GGTGACGCCT
GCCCCACCGA CACCTGTTCC TGAGCCTGCA CTGGCGAATT TCTTCGATGA CCGGCGGCTG
ACCTACGAGC CGGATTTCTA CGCGATCCAG ATTCAGGCGT TCCTCGATGG TCAGGCTGGT
CCGCTCAAAG GGATTATCGT GCCGGTTGGC GACCGCCAAC ACACTTTTGC TGAGGCGCTG
ACCGGTCAGG CAGTCTACTA CAGCGTCAAC CCCAAGATCA TTCTGGCGCT GATCGAAGTG
CAGAGCAACC TGATCAGCGA TCCGCAGCCA ACTGCCGATC AGTTCGCCTG GGCGGTCGGT
TTTCGTGGCG AGGACGGGCG GCGTCGCGGC TTGCAGGCGC AGGTGCGCTG GGCGGTCAAG
GAGTTGCTCT ATGCGCGGCG GGATTATCCG CAGCGCGTTG CGCTGACCTT TGCCGACGGC
AGCGCAGCGC CGCTGCCAGA AGGCATGTCG CTTGCTGAGT ATGCCCTGGC GCGGGTGCTC
GCGCCAACGA CGGTCCCGCA ACGTCTTCCA ACGTTGATGG AGCGCTTTCG CGCTACATAC
ACGCGCCTGT TCGACGACCC GCGCATCCCG CCGTCCGACT GGTTCCCGCC ATCTCAGCCG
TTTCTAACCC GCCCCATCGG TAGTGTCGTT CCGGTGACAT CGTTCTTCGA CCATGGTGGT
CCTTTTCTGA TGCGTAACAG CCGGAACGGG GTCGTCACGT ACTGGGGGCG AATCGAAACC
GATCCGATCT TTGCCTACAA TGGTCACGAC GGTTGGGACT ATGCCGCAGC GCCGCCCGAA
CGGGCGCTAG CGGCAGCCGA TGGGGTCGTT GTATTTGCCG GCAATGCCGA TGATGGCTGC
GCCACCCGCG CAGTCGCCAT CGACCACGAG AATGGCTACC GCACCCTCTA CTGGCACCTG
CACCGCGTGG ATGTCGCCAT TGGCGAACGG GTGACGCGCG GCCAACCAAT CGGCATAATC
GGCAATACCG GGTGCTCAAC AGGTCCTCAT TTGCATTTTG GCGTCCAGTA CCTGGGGCGT
AACACCGATC CGTATGGGTG GTGCGGCAGC GAGGATGATC CCTGGCATGT CCATCCGGCT
GGCGTTGTGA GCGTCTGGCT CTGGATGGAT CGTCCCTCGC CGTGTGCGTC GCCGCCGCCG
GGAGGGGTCG CAGCCGACGC CGATCGTCCC GGGTTCTTTA CCGATGGTGA CGGGTGGAAA
CGCACTCCTA CCGGGCACAA CGGCGAGTCG CTGTTTACTG CATCGGTGCG TGGCGCCGGT
GGGCGCCCCT GGAAGGTGCG CGCGCTCACC CTCCCGTCGC TGGCGGTCTG GCGAGTAGAA
TTGCCTGCGG CAGGACGGTA CCGCGTGATC GCCTTCATCC CCTATGCCGT CAGTCGATTG
GGCGATGCCA CCGGCATGCG CTACCTGGTG CAGCACACCG ACGGTATGGC AGAGGTCGTC
GTCGATGCGG CAACCTACGC GAACGACTGG GTGGACCTTG GAACGTATCA GTTCGAGGAA
ACCGGCGCTG AAGTGGTGCT GACCAGTGCT GCTGAGGAGG GGATGCTCAC TATCTGGGCG
GATGTCGTCA TGTGGCTTCC GGTTATGCCA GACGAACCCG AACCTCAACG CTGA
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| Protein sequence | MPYRRLLNIL MTLALVACAA PSPPPAPTPQ AETSLTRVPD GATTPQPLLP TQTMAPTVTP
APPTPVPEPA LANFFDDRRL TYEPDFYAIQ IQAFLDGQAG PLKGIIVPVG DRQHTFAEAL
TGQAVYYSVN PKIILALIEV QSNLISDPQP TADQFAWAVG FRGEDGRRRG LQAQVRWAVK
ELLYARRDYP QRVALTFADG SAAPLPEGMS LAEYALARVL APTTVPQRLP TLMERFRATY
TRLFDDPRIP PSDWFPPSQP FLTRPIGSVV PVTSFFDHGG PFLMRNSRNG VVTYWGRIET
DPIFAYNGHD GWDYAAAPPE RALAAADGVV VFAGNADDGC ATRAVAIDHE NGYRTLYWHL
HRVDVAIGER VTRGQPIGII GNTGCSTGPH LHFGVQYLGR NTDPYGWCGS EDDPWHVHPA
GVVSVWLWMD RPSPCASPPP GGVAADADRP GFFTDGDGWK RTPTGHNGES LFTASVRGAG
GRPWKVRALT LPSLAVWRVE LPAAGRYRVI AFIPYAVSRL GDATGMRYLV QHTDGMAEVV
VDAATYANDW VDLGTYQFEE TGAEVVLTSA AEEGMLTIWA DVVMWLPVMP DEPEPQR
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