| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0034 |
|---|
| Symbol | ndk |
|---|
| ID | 5537492 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 46487 |
|---|
| End bp | 46936 |
|---|
| Gene Length | 450 bp |
|---|
| Protein Length | 149 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640892200 |
|---|
| Product | nucleoside diphosphate kinase |
|---|
| Protein accession | YP_001430191 |
|---|
| Protein GI | 156740062 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG0105] Nucleoside diphosphate kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 31 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGAGCGTT CGCTGATCAT TCTGAAACCC GATGCCGTGC AGCGTGGACT GATCGGACCG
ATCCTGACAC GGATTGAACA GCGCGGCTTG CGGATTGTCG GCTTGAAGTT AATGCAGATC
GATGAAGCGC TGGCGCGCCG ACATTATGCC ATTCACGAGG GGAAGCCGTT TTTCGACAGT
TTGATCGCCT ATATCACCTC GGGTCCGGTA GTTGTCCTGG TCGTGACCGG CGCGAATGTC
ATCGAAATGG TGCGCTCGAT GGTCGGCGCC ACCAACCCGG GCAAAGCGGC GCCGGGCACG
ATTCGTGGTG ATTTTGCGCT GGAGATCGGA AGGAACCTCA TCCATGCTTC AGACTCGCCG
GAAAATGGCG AGATGGAGGT GAACCTGTTC TTCCGCGCCG AGGAACTGGT CGATATGCGC
CGCAGCACTG ACCAGTGGAT CTATGAGTAG
|
|---|
| Protein sequence | MERSLIILKP DAVQRGLIGP ILTRIEQRGL RIVGLKLMQI DEALARRHYA IHEGKPFFDS
LIAYITSGPV VVLVVTGANV IEMVRSMVGA TNPGKAAPGT IRGDFALEIG RNLIHASDSP
ENGEMEVNLF FRAEELVDMR RSTDQWIYE
|
|---|
| |