| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0030 |
|---|
| Symbol | |
|---|
| ID | 5537487 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Roseiflexus castenholzii DSM 13941 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009767 |
|---|
| Strand | + |
|---|
| Start bp | 38648 |
|---|
| End bp | 39301 |
|---|
| Gene Length | 654 bp |
|---|
| Protein Length | 217 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 640892195 |
|---|
| Product | deoxynucleoside kinase |
|---|
| Protein accession | YP_001430187 |
|---|
| Protein GI | 156740058 |
|---|
| COG category | [F] Nucleotide transport and metabolism |
|---|
| COG ID | [COG1428] Deoxynucleoside kinases |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 18 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 22 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAGAAACG GACGTTATTA TGTCACCGTC GCCGGCAATA TCGGCGTCGG CAAAAGCACG
CTGGTCGGTA TTCTGGCGGA AGAATTCAAC TGGCAGCCGT ACTACGAATT GGTTGCCGAC
CATCCGTATC TGGACGACTA CTACCGTGAT CGTGAGCGCT GGGGCTTTCA TTCGCAGATC
TGGTTTCTGA CGCAACGCTA TCAGCAGCAT CTCGAAATCG CCGATACGCC GATTTCAGTG
TGCCAGGATC GGAGTATCTA CGAGGACTAC GAAGTGTTCG TGAAAGGGCT GCTGGAGCAG
CGCATCCTCA GCCACCGCGA CTTTCGCACC TACCGGCAGT TGTTCCTGGC GCTGGTGCAG
AGCATTGCGC CGCCAACGCT CCTGATCCAT CTCTACGCCA GCGTGCCGAC GCTCATCCGG
CGCATCAACG AACGCGATCG TCCTGCGGAA CGCGCCATTC CACCTGCGTA CCTGGAACAT
CTGAACCGGC GCTACGACGA ATGGCTGCGA CGCTTTGAGT TGTGCCCGGT GTTGCGCATC
GAAACCGATG ATCTCGATTT TGCGCACGAT GCCGCCGCGC GGCGCGAGGT GGTCGAGTTG
ATTGCGCAGA CGCTGGGGTT GCGCGGTATG GTGCAGGAAC GTTTCGTTCC ATAA
|
|---|
| Protein sequence | MRNGRYYVTV AGNIGVGKST LVGILAEEFN WQPYYELVAD HPYLDDYYRD RERWGFHSQI
WFLTQRYQQH LEIADTPISV CQDRSIYEDY EVFVKGLLEQ RILSHRDFRT YRQLFLALVQ
SIAPPTLLIH LYASVPTLIR RINERDRPAE RAIPPAYLEH LNRRYDEWLR RFELCPVLRI
ETDDLDFAHD AAARREVVEL IAQTLGLRGM VQERFVP
|
|---|
| |