| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0028 |
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| Symbol | |
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| ID | 5537485 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 34407 |
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| End bp | 36539 |
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| Gene Length | 2133 bp |
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| Protein Length | 710 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 640892193 |
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| Product | glycosyl transferase group 1 |
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| Protein accession | YP_001430185 |
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| Protein GI | 156740056 |
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| COG category | [H] Coenzyme transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0438] Glycosyltransferase
[COG2226] Methylase involved in ubiquinone/menaquinone biosynthesis |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 0.310155 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCATATTC TGGTTGTACT CACCTACTAC TACCCTCACT GGACGAGTCT GACGGTTCAT
GCGGTGCGCG TGGCGGAGCA TCTGGCGGAA CGGGGACATA CGGTGACGGT GCTGACAACC
AGGCACACCC TCGACCTGGC GCGAGACGAG ATGGTCAACG GCGTGCGCGT GGTCCGCCTC
TGGCCCATCG CGCGCTTCAG TCGCGGGATG ATCACCCCGG CGTTTCCCTG GGCGGTGGCG
CAACTGATCG CTGAGCATGA TGTCGTGCAG ATTCATACGC CTCTCCCGGA AGCGCCGTTG
GTGGCGGCGT TGTGTCGCGC GCTCGGGCGT CCCCTTTTAA TGACGCATCA TGGCGATGTG
GTCATGCCGG ATAGTCCGGC GGAAAAACTC GTCGAGCGCG CTGCGTTCCA TATCCTCCGC
TTTGCGGCGA CTCTGGCGGA TGGCATCACC TCGTACAGCG AGGATTATGC CCGCCATTCG
CCATTGCTCT GGTCCTTCCG CGATAAACTG ACGTGCATCT ATCCGCCGGT GGAGTTCCCC
GAACCAGACC CCGTCGCTGC CGCCGCCTGG AAACGCGACC TGGGGCTTGA AGGGAAATGC
CTGATCGGTT TCGCCGGTCG CTGGGTGAGC GAAAAAGGGT TCGATGACCT GCTGCGGGCA
TTACCGCTCA TTCGCGCCGC TTTGCCTACA GCGCACCTGG TCTTCGCCGG TGAACGCAAC
GTCGTCTACG ACGATTTCTA TCGCGTATGC CAGCCACTGA TCGAGGCGCA GCAGGAACAT
ATTACCTTCC TTGGTCTGAT CCGGGATCGC CGGCAACTGG CGCAGTTCTA TGCCATGCTC
GATCTGTTCG TGTTGCCCAG CCATACCGAT ATGATGGCGC TGACGCAGAT TGAGGCGATG
TTGTGCGGAA CCCCGGTTGT AGCGACGGAC ATCCCCGGCG CGCGCGTGGT GGTGCGCGAA
ACCGGCTTCG GGCGCCTTGC GCCGCCGTAC AACCCACCGG CGCTGGCGCA GGTGATCCTC
GAAACGCTGC GCGACCGCGA ACGCTACCTG CCCAATCCGG CCGGCGTTCG CCGTATCTTC
AATACTCAAC AGACCATCGA TGCCTATGAG CGATTACTCG ATTGGTTGGT GCGCACGCGG
AGTCGCACGA ACCTCGCTGC GCGCGCGAGC CGCCGTCTGG TGCGCAGCAC CCTCCATGTT
ATCGCTGCGG CGCCGGTGAC GGCGACGACA ACGATGCTCA CGTCATCTGC GCCGCACACC
GTCGATGCTC CCCGGTCCGG CTCGCTTTCC AACGCCGATC GGGCGCTGCT CGAGCGTCTG
CTGCGCAATG AAGCGGATAT GGCGTACCGC CGCCGTGCAA TCACCCTGCT CGATTACCTC
GAACTCCACG ATGGTGAAAC GGTGCTCGAT TGCGGATGCG GCATGGGCGT CTATTTGATG
TTCATGGGGC GGCTGCGGCG ATTAAACCTG GTCGGCGTCG ATGGCGATAT GGAGCGTCTG
CGCTGGGCGG AGCGCGAACA TGTGCCGGCC AGTTTGTCGA ATGTCGATAT TCATCGCCTG
CCGTTTGCAG ACAACAGTTT CGACAAGGTG TTGATGTCCG AGGTGCTTGA ACATCTCACC
GATGATCGCG GTGCGCTGCG CGAAATCTTT CGCATTCTTA AGCCCGGCGG TGTTCTGGCG
CTCAGCGTGC CGCACGCGAA TTATCCGTTC TGGTGGGACC CGATCAACAA AACCATCGAG
GCGCTTGGCA TGCGCCCCAT CCAGAGCGCC GGACCGATCG CCGGTCTATG GAGCAACCAC
TGGCGGTTGT ATCGCCCGGA AACGCTGCGC GATGTGGTGT CGGGAGCGGG GTTTGCCATC
GAGGCGCTTG AAGAGCAGAC GCACTATGCG TTTCCGTTTA TCCATTTCAT CGTATACAGC
ATCGGAAAGC CGCTGATCGA AAAGAATATG CTGCCGCGCC GCTTCCGCGA CAGCGCCGAC
CGCTTTCGTG GTGAACGCAA CAGTGGCAGT CTGCTCAATC CGATCAACCT TGGGGTGCGG
TTGTTCCGCC TTGCGGATGC GCGCAATGAT CATCTGCGCG GTGATGAGCA AACATTCGTT
AGCATCGTTC TCAAAGCGCG AAAACCTGTC TGA
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| Protein sequence | MHILVVLTYY YPHWTSLTVH AVRVAEHLAE RGHTVTVLTT RHTLDLARDE MVNGVRVVRL
WPIARFSRGM ITPAFPWAVA QLIAEHDVVQ IHTPLPEAPL VAALCRALGR PLLMTHHGDV
VMPDSPAEKL VERAAFHILR FAATLADGIT SYSEDYARHS PLLWSFRDKL TCIYPPVEFP
EPDPVAAAAW KRDLGLEGKC LIGFAGRWVS EKGFDDLLRA LPLIRAALPT AHLVFAGERN
VVYDDFYRVC QPLIEAQQEH ITFLGLIRDR RQLAQFYAML DLFVLPSHTD MMALTQIEAM
LCGTPVVATD IPGARVVVRE TGFGRLAPPY NPPALAQVIL ETLRDRERYL PNPAGVRRIF
NTQQTIDAYE RLLDWLVRTR SRTNLAARAS RRLVRSTLHV IAAAPVTATT TMLTSSAPHT
VDAPRSGSLS NADRALLERL LRNEADMAYR RRAITLLDYL ELHDGETVLD CGCGMGVYLM
FMGRLRRLNL VGVDGDMERL RWAEREHVPA SLSNVDIHRL PFADNSFDKV LMSEVLEHLT
DDRGALREIF RILKPGGVLA LSVPHANYPF WWDPINKTIE ALGMRPIQSA GPIAGLWSNH
WRLYRPETLR DVVSGAGFAI EALEEQTHYA FPFIHFIVYS IGKPLIEKNM LPRRFRDSAD
RFRGERNSGS LLNPINLGVR LFRLADARND HLRGDEQTFV SIVLKARKPV
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