Gene Rcas_0026 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0026 
Symbol 
ID5537483 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp32298 
End bp32636 
Gene Length339 bp 
Protein Length112 aa 
Translation table11 
GC content68% 
IMG OID640892191 
Producthypothetical protein 
Protein accessionYP_001430183 
Protein GI156740054 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.373044 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.0108948 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGCGAGTC GCTCACATCA GGATAAGCGA CATGCCCCCA CGCTGCTCCA CGCTCGCCAC 
GCGCTCCCAC AGCCGCTCAG CATCAGTCCG GCTCCCATCC CATGCGGCGA TGGGCTTGCC
ACACACCGTC CGTGCGCGCA TCCGCCCGAT GGCGCGCTCC GTCCGATGAT TGGTCTTCGG
CGCGCCCTCC GCCCGCTGAA CTGCACCAAA CGCTTCCCAA TCCTCACGCA CGCGGCGCGC
CATATCGCGC AGCCGCGCCG GGGACTGCGC TCCCCTTTCT CCTCTGCGGT CCAGGATGCT
GCCGCCATTC CTCGAACAAC CGTCGCGTGC CATCCGTAG
 
Protein sequence
MASRSHQDKR HAPTLLHARH ALPQPLSISP APIPCGDGLA THRPCAHPPD GALRPMIGLR 
RALRPLNCTK RFPILTHAAR HIAQPRRGLR SPFSSAVQDA AAIPRTTVAC HP