| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0019 |
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| Symbol | |
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| ID | 5537476 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | - |
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| Start bp | 21418 |
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| End bp | 22704 |
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| Gene Length | 1287 bp |
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| Protein Length | 428 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892184 |
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| Product | acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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| Protein accession | YP_001430176 |
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| Protein GI | 156740047 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0624] Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases |
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| TIGRFAM ID | [TIGR01910] acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.191094 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.000354462 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGATGGTGA CCGATCCGGT CGAGCGTGCA GTCATTGAAG CGATTGATAT CGACGGGTTA
CTGGCGTTCC TTGGCGACCT GGTGGCAATT CCGAGTCTCG ACGGCGCCTC TGGCGAAGTG
GCGGCGCAGG AATATGTGGC GGCGTTCCTG GAGCGACTGG GGTGCAAAGT GGATGTCTGG
GAGATCGATT TCGATGAACT TCGCCGCCAT CCAGCATTTT CGGCAGAAGT GGAGCGCAAG
CGCGGGTTGG GGGTCGTGGG CGTCGGGGGG TTGGGGAATG GACCGACCCT CATCTTCAAT
GGGCACGTCG ATGTCGTGCC GGCTGGCGAC GAGTCGTTGT GGCGTTTCCC GCCGTGGCAG
GCGACGATTG CCGACGGCTA CGTGTATGGG CGCGGTGCGC TTGATATGAA GGGCGGGTTG
GCGTGCGCTA TCTTCGCTGC ACAAGCCATC CGCGATGCTG GCGTGCAACT GAGGGGGCGT
CTGCTCATCC AGAGTGTGAT CGGCGAGGAG GACGGGGGAT GCGGCACGCT CGCTACAGTG
TTGCGTGGTC ACACCGGCGA TGGCGCAATT GTCGTCGAGC CAACTGAACT CCGCATCGCG
CCGGCGCAGG CGGGGGCGCT CAACTTTCGT CTGATGGTTC CCGGCGCTGC TGCGCATGGG
TGTGTGCGCG AAGAAGGGAT CAGCGCCATC GAAAAGTTCA TGCCGCTCTA TCGGGCGCTG
ACGGACCTCG AAGCCATACG GAATGCCGCA GCCCGGCTGC GGGATGACCC CATTAGCCAG
CTCTATCGTC GGTACTCGCT CCCATACGCA TTGTGCATCG GCGTGGTGCG CGCCGGCGAA
TGGGCTTCGA CCGTCGCCGA AACGCTCGTC GCTGAAGGGA GGTACGGCGT GGCTGTCGGT
GAAGACCTGG AAGCGGCGCG GCGCATGCTG GAGGAAGCGG TTGCGCGCGC GGCACAAGCC
GATCCGTGGC TTCGTGAGCA TCCGCCGCGT GTTGAGTGGT GGGGCGGGCA GTTTGCGCCT
GCAAGCATTC CTGCGGATCA CCCGCTGGTG CAGACAACCG CAGCCGCGTT CGCCGACACC
ACCAATGCGC CTGCCATACT CGAAGGCATG ACCTATGGCG CCGATATGCG TCTGCTGGTG
AACGAAGGAC GCACTCCAAC GATCCTCTTC GGACCAGGCG ATGTGCGCAA TGCCCACCGT
CCGAATGAAC GGATCGCCAT TGCCGACCTG CGCATTGCTA CGCAAACCCT GGCGCTGACG
GCACTGCGCT TCTGCGGTAT CGCATGA
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| Protein sequence | MMVTDPVERA VIEAIDIDGL LAFLGDLVAI PSLDGASGEV AAQEYVAAFL ERLGCKVDVW
EIDFDELRRH PAFSAEVERK RGLGVVGVGG LGNGPTLIFN GHVDVVPAGD ESLWRFPPWQ
ATIADGYVYG RGALDMKGGL ACAIFAAQAI RDAGVQLRGR LLIQSVIGEE DGGCGTLATV
LRGHTGDGAI VVEPTELRIA PAQAGALNFR LMVPGAAAHG CVREEGISAI EKFMPLYRAL
TDLEAIRNAA ARLRDDPISQ LYRRYSLPYA LCIGVVRAGE WASTVAETLV AEGRYGVAVG
EDLEAARRML EEAVARAAQA DPWLREHPPR VEWWGGQFAP ASIPADHPLV QTTAAAFADT
TNAPAILEGM TYGADMRLLV NEGRTPTILF GPGDVRNAHR PNERIAIADL RIATQTLALT
ALRFCGIA
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