Gene Rcas_0018 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagRcas_0018 
Symbol 
ID5537475 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameRoseiflexus castenholzii DSM 13941 
KingdomBacteria 
Replicon accessionNC_009767 
Strand
Start bp18464 
End bp19081 
Gene Length618 bp 
Protein Length205 aa 
Translation table11 
GC content64% 
IMG OID640892183 
ProductBioY protein 
Protein accessionYP_001430175 
Protein GI156740046 
COG category[R] General function prediction only 
COG ID[COG1268] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.000199845 
Fosmid HitchhikerYes 
Fosmid clonabilityhitchhiker 
 

Sequence

Gene sequence
ATGGTCGCAC CATCGGTCAG CCATCCGTCG CTCGCGCAGG CTGTCTTTCC ACGTGCATCA 
TGGGTGCGCG ATCTGCTGCT CGTTGTTGGG GGAGTGATCG TTGTGGCGCT GCTGGCGCAG
GTTCGGATAG CGCTGCCGTT TACGCCAGTT CCGATCACAG GCCAGACGCT GGGGGTGATG
TTGATCGGCG CGGCATACGG ATGGCGATTG GGGTTCATCA CGCTGGCGAC ATATGTGGCA
TCAGGAGTCG TGGGGCTGCC GGTCTTCGCG GGTGGTGCCG CCGGTCTGGC ACGTCTCTTC
GGTCCGACAG GCGGGTATCT GGTGGCGTTT CCGCTGGCGG CGGCATTGAT CGGTTTTCTG
GTGCAGCGCT TCGGCGTTGA TCGCCATCCG TTGCGTATGG CGGCGTCGAT GGCACTCTGC
TCGGTGCTCA TCCTGGGGTT GGGTTCGACG TGGCTGGCAT TCGCGCTTCA GACCAGCATG
AGTGATGCGC TGGCGAAAGG CGCGTTCCCC TTCATCCCCG GCGATCTGGT CAAGATGACG
ATTGCGGCGC TGCTCCTGCC CGGCGCATGG CGCCTCATAG GGCGCGCTGG CGTTCATGAG
AACGCCCCTC AAGGGTAA
 
Protein sequence
MVAPSVSHPS LAQAVFPRAS WVRDLLLVVG GVIVVALLAQ VRIALPFTPV PITGQTLGVM 
LIGAAYGWRL GFITLATYVA SGVVGLPVFA GGAAGLARLF GPTGGYLVAF PLAAALIGFL
VQRFGVDRHP LRMAASMALC SVLILGLGST WLAFALQTSM SDALAKGAFP FIPGDLVKMT
IAALLLPGAW RLIGRAGVHE NAPQG