| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Rcas_0013 |
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| Symbol | |
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| ID | 5537470 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Roseiflexus castenholzii DSM 13941 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009767 |
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| Strand | + |
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| Start bp | 11062 |
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| End bp | 12375 |
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| Gene Length | 1314 bp |
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| Protein Length | 437 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 640892178 |
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| Product | phospholipid/glycerol acyltransferase |
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| Protein accession | YP_001430170 |
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| Protein GI | 156740041 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG0204] 1-acyl-sn-glycerol-3-phosphate acyltransferase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000782429 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0000745066 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGTCGGACG CTCCCGAATC GAACACCCAC GATCAGTCTC CAGCGATAGA TGAATCGAAT
GTCGTGGAAG GACTTCAAGA GACTGCGCCT GCCGTTGAAA CGGAAGAGCA TATCCCGCTC
TCCGACGCTG TTCCTGCGCC CGCTGAAATC TCTGCGCCGG AGCCGGAAGA GGCGCCGCCG
GCGCCAGAGG AAGAGATCGG CGTGGCGTAT GCCGGTGAAC GCCCCCCGCC GGTCGATCCG
GTTGCAACAC TGCGCGCCGA AACTGCCGCA GCCGTGCAGG AGCTGGAAGT CGAGATCCGC
AATCAGACCG AAGGATCGGC AGAAACCCGC GATCTGGCAG CCGACCTCCT GCGCCTGATC
CGCGAGAACC TTGAGCGCCT GCGCCCGCCG GCGCTCGATA ATGTCGTGAC AGCGCTACGC
CAGAATGTGT TCAACAGCGA CTATCTCGAC CCGGATTTCT GGCGTGGTAT CGCCATGGTG
CTTCAGTATC AGGTCACCGA ACTGACGGCG CTGATCCAGC GCCGGCTGCG CGGCGAGTTT
GCCGTTGACG CCTACGGGAT GGACTCCGAA CTCATCGAGT TGGTGCGCCC GGTTGCCGGT
TTCCTCTACC GTTCCTGGTG GCGCGTCACG AGTGAAGGAC TCGATGGCAT CCCCGCTGAA
GGACCGGCGC TGCTGCTGGC GAACCATTCC GGCGTCCTGC CGTGGGATAG CGCGATGATT
GCCACCGCCG TGCTCGAAGA TCATCCATCA CAGCGATTGG TGCGGTCGCT CCACGACCCC
TGGATGATAA CCGTGCCCGG TCTTGCGCCT GCCCTTGCCG CATTCGGTCA GGCGCCGGCG
CTGCCGGAGA ATGCGGCGCG CCTGCTGGAC GACGGTCAAC TCGTCTGCGC TTTTCCAGAA
GGCGCGCAGG GGGCAGGGAA ACTCTTCTGG AACCGCTACC GCCTGACCGG TTTCGATGCG
CGCGACTACA TTCGGGTTGC GCTGCGCGCC GGTGCGCCGA TCATTCCCGT TGCCGTCATT
GGCGCCGAAG AGATCTACCC GATGCTGATC AACGTCCGCC CGGTCGCCCA ACTGCTGAAC
CTTCCCTACT TCCCGCTGAC GCCGCTGTTC CCGTGGTTTG GTCTGCTGGG CATTACACCA
CTGCCGAGCA AATGGTCGAT CATCTTCGAC ACGCCGATTG ACCCATCCGT CTATGGTGCC
GCAGCCGCCG ACGATCCGAC GACAATTGCG CAGATCAACG ATCTGGTACA GCGCCGGATT
CAGTCGCTGC TCGATGAACG CACCGCCGCG CGACGGTCGA TATTCTTTGG GTGA
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| Protein sequence | MSDAPESNTH DQSPAIDESN VVEGLQETAP AVETEEHIPL SDAVPAPAEI SAPEPEEAPP
APEEEIGVAY AGERPPPVDP VATLRAETAA AVQELEVEIR NQTEGSAETR DLAADLLRLI
RENLERLRPP ALDNVVTALR QNVFNSDYLD PDFWRGIAMV LQYQVTELTA LIQRRLRGEF
AVDAYGMDSE LIELVRPVAG FLYRSWWRVT SEGLDGIPAE GPALLLANHS GVLPWDSAMI
ATAVLEDHPS QRLVRSLHDP WMITVPGLAP ALAAFGQAPA LPENAARLLD DGQLVCAFPE
GAQGAGKLFW NRYRLTGFDA RDYIRVALRA GAPIIPVAVI GAEEIYPMLI NVRPVAQLLN
LPYFPLTPLF PWFGLLGITP LPSKWSIIFD TPIDPSVYGA AAADDPTTIA QINDLVQRRI
QSLLDERTAA RRSIFFG
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